Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 Y_RNA.459-201ENST00000384251 102 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 RNU6-921P-201ENST00000384361 107 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 RNU6-331P-201ENST00000384724 107 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 AL592114.1-201ENST00000403842 483 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 PRRC2CP1-201ENST00000404428 159 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.96□□□□□ -1.78
COL11A2P13942 AL451054.2-201ENST00000420896 202 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 AL589765.3-201ENST00000446084 462 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 MRPS17P3-201ENST00000465453 385 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 GMFBP1-201ENST00000467831 427 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 AC055855.1-201ENST00000489563 579 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A2P13942 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.96□□□□□ -1.78
COL11A2P13942 FAM206BP-201ENST00000510179 541 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A2P13942 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A2P13942 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.96□□□□□ -1.78
COL11A2P13942 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A2P13942 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.96□□□□□ -1.78
COL11A2P13942 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.96□□□□□ -1.78
COL11A2P13942 AC100830.2-201ENST00000581636 240 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 uc_338.15-201ENST00000615470 191 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 uc_338.11-201ENST00000619132 160 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.96□□□□□ -1.78
COL11A2P13942 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.96□□□□□ -1.78
COL11A2P13942 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 AC000123.3-201ENST00000624029 4975 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A2P13942 AC107081.3-201ENST00000612715 2034 ntBASIC3.96□□□□□ -1.78
COL11A2P13942 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
COL11A2P13942 RNA5SP432-201ENST00000362480 116 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 Y_RNA.184-201ENST00000363884 108 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 Y_RNA.187-201ENST00000363918 113 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A2P13942 RN7SKP284-201ENST00000411002 343 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AL358176.2-201ENST00000425769 204 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AL135938.1-201ENST00000443141 297 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AL357552.1-201ENST00000445254 415 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 BTF3P15-201ENST00000455606 336 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 MTND5P22-201ENST00000458380 195 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC104563.1-201ENST00000476147 376 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC126389.1-201ENST00000477436 290 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 S100A11P1-201ENST00000477525 312 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC021146.2-201ENST00000504736 556 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 TXNP6-201ENST00000510190 310 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 RN7SKP132-201ENST00000516001 208 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 RN7SKP219-201ENST00000516825 296 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC115085.1-201ENST00000588924 229 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AP001330.4-201ENST00000604350 154 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AL391813.2-201ENST00000609113 322 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 OR6R2P-201ENST00000609216 300 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL11A2P13942 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL11A2P13942 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A2P13942 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL11A2P13942 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A2P13942 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL11A2P13942 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL11A2P13942 RNU6-441P-201ENST00000384545 106 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 MIR649-201ENST00000384843 97 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 RNU6-903P-201ENST00000391270 109 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 HSPE1P1-201ENST00000421494 318 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC002075.2-201ENST00000425207 252 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC099560.2-201ENST00000457554 255 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 RPL21P99-201ENST00000480369 423 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC233702.1-201ENST00000482905 502 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 RPL23AP41-201ENST00000484754 458 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 HMGB3P15-201ENST00000507326 574 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.95□□□□□ -1.78
COL11A2P13942 RNU6-1046P-201ENST00000516538 107 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AC004817.2-201ENST00000561794 651 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.95□□□□□ -1.78
COL11A2P13942 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.95□□□□□ -1.78
COL11A2P13942 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL11A2P13942 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL11A2P13942 AL451142.2-201ENST00000429076 2090 ntBASIC3.95□□□□□ -1.78
COL11A2P13942 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
COL11A2P13942 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms