Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC024581.2-201ENST00000619986 252 ntBASIC2.15□□□□□ -2.07
TPM1P09493 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM1P09493 AC243829.7-201ENST00000633081 225 ntBASIC2.15□□□□□ -2.07
TPM1P09493 RNU6-778P-201ENST00000363269 103 ntBASIC2.14□□□□□ -2.07
TPM1P09493 RNU5B-1-201ENST00000363286 116 ntBASIC2.14□□□□□ -2.07
TPM1P09493 MTND3P20-201ENST00000407663 186 ntBASIC2.14□□□□□ -2.07
TPM1P09493 RPL23AP83-201ENST00000434984 473 ntBASIC2.14□□□□□ -2.07
TPM1P09493 FABP5P14-201ENST00000437273 393 ntBASIC2.14□□□□□ -2.07
TPM1P09493 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.14□□□□□ -2.07
TPM1P09493 RPL23AP41-201ENST00000484754 458 ntBASIC2.14□□□□□ -2.07
TPM1P09493 RNU6-714P-201ENST00000516963 103 ntBASIC2.14□□□□□ -2.07
TPM1P09493 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM1P09493 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM1P09493 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
TPM1P09493 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
TPM1P09493 uc_338.14-201ENST00000613162 166 ntBASIC2.14□□□□□ -2.07
TPM1P09493 AL118508.4-201ENST00000624142 1176 ntBASIC2.14□□□□□ -2.07
TPM1P09493 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.14□□□□□ -2.07
TPM1P09493 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 RNU6-486P-201ENST00000363116 107 ntBASIC2.13□□□□□ -2.07
TPM1P09493 RNU6-609P-201ENST00000365459 107 ntBASIC2.13□□□□□ -2.07
TPM1P09493 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 RNU6-207P-201ENST00000384137 107 ntBASIC2.13□□□□□ -2.07
TPM1P09493 MCTS2P-201ENST00000394552 546 ntBASIC2.13□□□□□ -2.07
TPM1P09493 RPL22P22-201ENST00000395439 379 ntBASIC2.13□□□□□ -2.07
TPM1P09493 Z92545.1-201ENST00000411782 234 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL139156.1-201ENST00000412785 841 ntBASIC2.13□□□□□ -2.07
TPM1P09493 OR4K6P-201ENST00000416478 897 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM1P09493 USP9YP22-201ENST00000438971 294 ntBASIC2.13□□□□□ -2.07
TPM1P09493 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM1P09493 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 MOB1AP2-201ENST00000446060 614 ntBASIC2.13□□□□□ -2.07
TPM1P09493 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.13□□□□□ -2.07
TPM1P09493 AC092902.1-201ENST00000486999 259 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.13□□□□□ -2.07
TPM1P09493 AC008526.1-201ENST00000509149 338 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM1P09493 AC006499.2-201ENST00000513470 337 ntBASIC2.13□□□□□ -2.07
TPM1P09493 RNA5SP290-201ENST00000517133 127 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM1P09493 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.13□□□□□ -2.07
TPM1P09493 MIR3122-201ENST00000577243 73 ntBASIC2.13□□□□□ -2.07
TPM1P09493 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AC090897.2-201ENST00000581715 130 ntBASIC2.13□□□□□ -2.07
TPM1P09493 MIR3162-201ENST00000581818 82 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AC005261.5-201ENST00000596280 355 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL390838.2-201ENST00000602394 274 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL109918.3-201ENST00000603072 338 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AC004805.2-201ENST00000605382 482 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL121652.1-201ENST00000608851 448 ntBASIC2.13□□□□□ -2.07
TPM1P09493 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL356266.1-201ENST00000623311 483 ntBASIC2.13□□□□□ -2.07
TPM1P09493 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM1P09493 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TPM1P09493 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.12□□□□□ -2.07
TPM1P09493 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TPM1P09493 AL359854.1-201ENST00000614203 1594 ntBASIC2.12□□□□□ -2.07
TPM1P09493 MIR483-201ENST00000385070 76 ntBASIC2.12□□□□□ -2.07
TPM1P09493 TPMTP2-201ENST00000414372 726 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM1P09493 AIMP1P2-201ENST00000425294 312 ntBASIC2.12□□□□□ -2.07
TPM1P09493 MTCO1P3-201ENST00000429327 192 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
TPM1P09493 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM1P09493 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.12□□□□□ -2.07
TPM1P09493 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.12□□□□□ -2.07
TPM1P09493 MTND2P20-201ENST00000440805 661 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AL136380.1-201ENST00000447970 162 ntBASIC2.12□□□□□ -2.07
TPM1P09493 RPL21P134-201ENST00000453468 483 ntBASIC2.12□□□□□ -2.07
TPM1P09493 PMCHL2-203ENST00000457791 237 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AC107032.1-201ENST00000485945 480 ntBASIC2.12□□□□□ -2.07
TPM1P09493 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM1P09493 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.12□□□□□ -2.07
TPM1P09493 MIR5089-201ENST00000580047 84 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.12□□□□□ -2.07
TPM1P09493 AP001269.3-201ENST00000588718 329 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.12□□□□□ -2.07
TPM1P09493 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.12□□□□□ -2.07
TPM1P09493 AL139344.1-201ENST00000605228 195 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AL583856.2-201ENST00000606298 543 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AL357080.1-201ENST00000617394 239 ntBASIC2.12□□□□□ -2.07
TPM1P09493 AC007490.1-201ENST00000624321 703 ntBASIC2.12□□□□□ -2.07
TPM1P09493 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TPM1P09493 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM1P09493 RNU6-468P-201ENST00000384003 109 ntBASIC2.11□□□□□ -2.07
TPM1P09493 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
TPM1P09493 RPL26P27-201ENST00000414397 437 ntBASIC2.11□□□□□ -2.07
TPM1P09493 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.11□□□□□ -2.07
TPM1P09493 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM1P09493 AC007435.1-201ENST00000421086 415 ntBASIC2.11□□□□□ -2.07
TPM1P09493 FO393414.1-201ENST00000428697 1184 ntBASIC2.11□□□□□ -2.07
TPM1P09493 Z98742.2-201ENST00000431564 187 ntBASIC2.11□□□□□ -2.07
TPM1P09493 MTND1P9-201ENST00000453775 944 ntBASIC2.11□□□□□ -2.07
TPM1P09493 MTCO1P42-201ENST00000457379 726 ntBASIC2.11□□□□□ -2.07
TPM1P09493 RPL30P9-201ENST00000465586 330 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms