Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NDUFS5P1-201ENST00000405668 289 ntBASIC3.31□□□□□ -1.88
RB1P06400 RNU2-36P-201ENST00000410361 191 ntBASIC3.31□□□□□ -1.88
RB1P06400 RNU6-248P-201ENST00000410720 107 ntBASIC3.31□□□□□ -1.88
RB1P06400 MRPL50P2-201ENST00000416821 482 ntBASIC3.31□□□□□ -1.88
RB1P06400 AL139413.1-201ENST00000421309 217 ntBASIC3.31□□□□□ -1.88
RB1P06400 AC007919.1-201ENST00000429380 217 ntBASIC3.31□□□□□ -1.88
RB1P06400 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.31□□□□□ -1.88
RB1P06400 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 BNIP3P2-201ENST00000441221 577 ntBASIC3.31□□□□□ -1.88
RB1P06400 PIGFP3-201ENST00000441918 722 ntBASIC3.31□□□□□ -1.88
RB1P06400 USP9YP29-201ENST00000445112 563 ntBASIC3.31□□□□□ -1.88
RB1P06400 AL360221.1-201ENST00000445989 335 ntBASIC3.31□□□□□ -1.88
RB1P06400 Z99127.3-201ENST00000448158 395 ntBASIC3.31□□□□□ -1.88
RB1P06400 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.31□□□□□ -1.88
RB1P06400 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 RNU6-420P-201ENST00000458780 107 ntBASIC3.31□□□□□ -1.88
RB1P06400 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
RB1P06400 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.31□□□□□ -1.88
RB1P06400 RPL7P5-201ENST00000471472 736 ntBASIC3.31□□□□□ -1.88
RB1P06400 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 AC010424.1-201ENST00000506336 297 ntBASIC3.31□□□□□ -1.88
RB1P06400 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.31□□□□□ -1.88
RB1P06400 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.31□□□□□ -1.88
RB1P06400 RNU6-1282P-201ENST00000516735 96 ntBASIC3.31□□□□□ -1.88
RB1P06400 ATP5F1P5-201ENST00000526403 760 ntBASIC3.31□□□□□ -1.88
RB1P06400 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.31□□□□□ -1.88
RB1P06400 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
RB1P06400 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.31□□□□□ -1.88
RB1P06400 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.31□□□□□ -1.88
RB1P06400 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.31□□□□□ -1.88
RB1P06400 RSL24D1P11-201ENST00000591045 491 ntBASIC3.31□□□□□ -1.88
RB1P06400 DUXAP4-201ENST00000603046 613 ntBASIC3.31□□□□□ -1.88
RB1P06400 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.31□□□□□ -1.88
RB1P06400 AC013412.1-201ENST00000610687 192 ntBASIC3.31□□□□□ -1.88
RB1P06400 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.31□□□□□ -1.88
RB1P06400 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
RB1P06400 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
RB1P06400 MTND1P37-201ENST00000636562 264 ntBASIC3.31□□□□□ -1.88
RB1P06400 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RB1P06400 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
RB1P06400 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RB1P06400 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RB1P06400 AL390237.1-201ENST00000404226 1415 ntBASIC3.3□□□□□ -1.88
RB1P06400 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RB1P06400 RNY4P34-201ENST00000364779 95 ntBASIC3.3□□□□□ -1.88
RB1P06400 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
RB1P06400 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RB1P06400 RNA5SP184-201ENST00000411071 108 ntBASIC3.3□□□□□ -1.88
RB1P06400 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.3□□□□□ -1.88
RB1P06400 ZNF90P2-204ENST00000419323 1075 ntBASIC3.3□□□□□ -1.88
RB1P06400 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.3□□□□□ -1.88
RB1P06400 RAC1P6-201ENST00000423911 575 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC012498.1-201ENST00000424037 437 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC007283.2-201ENST00000424739 197 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC137499.1-201ENST00000427602 88 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.3□□□□□ -1.88
RB1P06400 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.3□□□□□ -1.88
RB1P06400 USP9YP15-201ENST00000442391 422 ntBASIC3.3□□□□□ -1.88
RB1P06400 RPL32P28-201ENST00000443577 397 ntBASIC3.3□□□□□ -1.88
RB1P06400 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.3□□□□□ -1.88
RB1P06400 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
RB1P06400 AC093392.2-201ENST00000450682 337 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.3□□□□□ -1.88
RB1P06400 AC013267.1-201ENST00000458227 267 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.3□□□□□ -1.88
RB1P06400 NDUFB4P2-201ENST00000509515 391 ntBASIC3.3□□□□□ -1.88
RB1P06400 RNU2-10P-201ENST00000516375 211 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RB1P06400 AC011602.1-201ENST00000546484 331 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.3□□□□□ -1.88
RB1P06400 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.3□□□□□ -1.88
RB1P06400 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.3□□□□□ -1.88
RB1P06400 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.3□□□□□ -1.88
RB1P06400 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
RB1P06400 AMZ2P1-203ENST00000565833 850 ntBASIC3.3□□□□□ -1.88
RB1P06400 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.3□□□□□ -1.88
RB1P06400 AC137800.2-201ENST00000574375 120 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.6-201ENST00000603753 252 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.11-201ENST00000604059 253 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL358072.1-201ENST00000604156 575 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC008162.1-201ENST00000604718 254 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.1-201ENST00000604752 252 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.5-201ENST00000605253 252 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.12-201ENST00000605291 253 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.8-201ENST00000605353 252 ntBASIC3.3□□□□□ -1.88
RB1P06400 AL670379.7-201ENST00000605823 252 ntBASIC3.3□□□□□ -1.88
RB1P06400 FRG1KP-201ENST00000623592 341 ntBASIC3.3□□□□□ -1.88
RB1P06400 PISRT1-201ENST00000626175 531 ntBASIC3.3□□□□□ -1.88
RB1P06400 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.3□□□□□ -1.88
RB1P06400 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.3□□□□□ -1.88
RB1P06400 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RB1P06400 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
RB1P06400 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.3□□□□□ -1.88
RB1P06400 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RB1P06400 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms