Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL603758.1-201ENST00000618654 241 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC253576.2-201ENST00000618815 580 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AC012150.2-201ENST00000621300 544 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 PISRT1-201ENST00000626175 531 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 AL691447.3-201ENST00000635020 330 ntBASIC1.74□□□□□ -2.13
HLA-DQB2P05538 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
HLA-DQB2P05538 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 FAM133CP-201ENST00000332869 704 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 RNU6-750P-201ENST00000390946 107 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 SNORA46.1-201ENST00000391069 153 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 RNU2-33P-201ENST00000410344 192 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AL109913.1-201ENST00000421173 514 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AL358453.1-201ENST00000422522 250 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 ZNF863P-201ENST00000426746 417 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC008850.1-201ENST00000427546 362 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AL451074.3-201ENST00000437709 472 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 KLF3P2-201ENST00000465138 268 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 DYNLL1P5-201ENST00000467158 270 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 RPS29P20-201ENST00000489592 171 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 TMEM251P1-201ENST00000503717 318 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC098591.2-201ENST00000510152 315 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC022447.1-201ENST00000515358 464 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC079148.1-201ENST00000565944 819 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC138915.2-201ENST00000569776 97 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC005951.2-201ENST00000576282 495 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC021749.1-201ENST00000604322 607 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 FTX_3.1-201ENST00000610451 147 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AL589743.7-201ENST00000612637 233 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 MTND1P37-201ENST00000636562 264 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 AC087821.2-201ENST00000637086 450 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DQB2P05538 MKKS-204ENST00000639674 192 ntBASIC1.73□□□□□ -2.13
HLA-DQB2P05538 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC005539.1-201ENST00000443768 1479 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 SNORA16B-201ENST00000364674 135 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 RPL22P22-201ENST00000395439 379 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 DHFRP6-201ENST00000401776 268 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 CYCSP49-201ENST00000420810 319 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 HMGB1P9-201ENST00000429856 646 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AL500527.1-201ENST00000448532 255 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC023141.11-201ENST00000508864 202 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 snoZ278.1-201ENST00000517059 112 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AP005902.1-201ENST00000521358 186 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 EEF1A1P37-201ENST00000522748 715 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AL359212.1-201ENST00000556608 614 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC136601.2-201ENST00000604356 474 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AL449363.1-201ENST00000617815 186 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 AC002550.2-201ENST00000621246 394 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 MIR1322-201ENST00000638013 71 ntBASIC1.72□□□□□ -2.13
HLA-DQB2P05538 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 Y_RNA.25-201ENST00000362528 102 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 RNU6-140P-201ENST00000384566 108 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 MIR17-201ENST00000385012 84 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 MIR888-201ENST00000401186 77 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC007919.1-201ENST00000429380 217 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 MICF-203ENST00000432679 129 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC092427.1-201ENST00000439177 601 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 OSTCP8-201ENST00000445117 448 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 RPS20P22-201ENST00000473700 357 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC079203.1-201ENST00000487972 404 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AP001189.2-201ENST00000527320 189 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 CYCSP26-201ENST00000534107 320 ntBASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DQB2P05538 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms