Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPS20P20-201ENST00000460498 340 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.74□□□□□ -1.97
MT-ND1P03886 RPS15AP36-201ENST00000492022 382 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AP000857.1-201ENST00000532151 543 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC034105.3-201ENST00000565294 442 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 MIR3913-1-201ENST00000577744 102 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 MTCO3P13-201ENST00000577757 781 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 MTND1P15-201ENST00000579262 949 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC008739.3-201ENST00000603262 127 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC090578.1-201ENST00000604955 591 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 RNU6-87P-201ENST00000607561 108 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC006566.1-201ENST00000608943 513 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC002064.3-201ENST00000623448 346 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 AC139792.2-201ENST00000624218 587 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND1P03886 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MT-ND1P03886 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 MIR22-201ENST00000362190 85 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 RNY4P34-201ENST00000364779 95 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 RNA5SP267-201ENST00000364893 126 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 OR5H15-201ENST00000383696 930 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 SNORD116-4-201ENST00000384733 96 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 RN7SKP220-201ENST00000410611 288 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AL139281.1-201ENST00000422120 335 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL365496.1-201ENST00000426885 215 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC009961.2-201ENST00000435771 251 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL714022.1-201ENST00000439897 151 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AL162389.1-201ENST00000449233 177 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 RNU7-23P-201ENST00000459465 62 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 RNA5SP291-201ENST00000517222 105 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AP002453.2-201ENST00000533503 320 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AGGF1P4-201ENST00000568249 801 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AC068135.2-201ENST00000569293 1028 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 MIR4293-201ENST00000584305 78 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AL359999.1-201ENST00000604513 294 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 AC093838.1-201ENST00000613014 469 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 TUG1_2.1-201ENST00000614234 87 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 MIR7112-201ENST00000616126 65 ntBASIC2.73□□□□□ -1.97
MT-ND1P03886 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.73□□□□□ -1.97
MT-ND1P03886 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.73□□□□□ -1.97
MT-ND1P03886 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MT-ND1P03886 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.73□□□□□ -1.97
MT-ND1P03886 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MT-ND1P03886 RNU5E-1-201ENST00000362477 120 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 SNORA63.1-201ENST00000362493 131 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RNU5A-8P-201ENST00000364102 114 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 SNORA23-201ENST00000365128 182 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RNU1-39P-201ENST00000383897 165 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RNU6-432P-201ENST00000384196 109 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 Y_RNA.559-201ENST00000384686 107 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 MIR7-3-201ENST00000384898 110 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RNA5SP120-201ENST00000410900 112 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.72□□□□□ -1.97
MT-ND1P03886 UBE2FP1-201ENST00000416536 447 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AC099548.1-201ENST00000421443 426 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 AC019097.1-201ENST00000424783 735 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RPL35AP22-201ENST00000436855 335 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 Z82210.1-201ENST00000440037 231 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 SNRPFP4-201ENST00000456366 242 ntBASIC2.72□□□□□ -1.97
MT-ND1P03886 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.72□□□□□ -1.97
MT-ND1P03886 AC117440.1-201ENST00000474107 571 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms