Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.12□□□□□ -1.75
CNOT4O95628 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.12□□□□□ -1.75
CNOT4O95628 AC117503.1-201ENST00000472241 394 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC026801.1-201ENST00000497178 464 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC116655.1-201ENST00000508324 901 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC093840.1-201ENST00000511599 336 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC021146.3-201ENST00000511911 260 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 AC026801.2-201ENST00000515352 425 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RNU6-470P-201ENST00000515954 104 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RNU2-69P-201ENST00000516061 100 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RNA5SP464-201ENST00000516251 108 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC009812.2-201ENST00000517657 457 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RNU6-323P-201ENST00000521915 107 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 OR8R1P-201ENST00000543943 764 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.12□□□□□ -1.75
CNOT4O95628 AC105129.1-201ENST00000560250 297 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 BNIP3P5-201ENST00000562290 498 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.12□□□□□ -1.75
CNOT4O95628 SNORD91B-202ENST00000608459 222 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.12□□□□□ -1.75
CNOT4O95628 TUG1_2.1-201ENST00000614234 87 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.12□□□□□ -1.75
CNOT4O95628 AL353748.2-201ENST00000622148 471 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 AC110801.1-201ENST00000623590 212 ntBASIC4.12□□□□□ -1.75
CNOT4O95628 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.12□□□□□ -1.75
CNOT4O95628 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CNOT4O95628 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CNOT4O95628 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CNOT4O95628 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CNOT4O95628 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CNOT4O95628 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 AC005592.1-201ENST00000566527 1640 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 AL158163.1-201ENST00000603915 1649 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 Y_RNA.126-201ENST00000363382 111 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RNU6-715P-201ENST00000365204 103 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RNU6-26P-201ENST00000383985 107 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RNU6-701P-201ENST00000384059 107 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 AC097374.1-203ENST00000400783 485 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 MIR1183-201ENST00000408856 89 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RNA5SP111-201ENST00000411386 101 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RPL23AP1-201ENST00000428990 471 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 HIGD1AP11-201ENST00000438361 280 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.11□□□□□ -1.75
CNOT4O95628 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.11□□□□□ -1.75
CNOT4O95628 AC091153.1-201ENST00000466297 402 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RPL7P23-201ENST00000493874 747 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.11□□□□□ -1.75
CNOT4O95628 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.11□□□□□ -1.75
CNOT4O95628 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.11□□□□□ -1.75
CNOT4O95628 SNORA31.8-201ENST00000516327 108 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.11□□□□□ -1.75
CNOT4O95628 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CNOT4O95628 GNAI2P1-201ENST00000541815 315 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 RN7SL176P-201ENST00000580352 264 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.11□□□□□ -1.75
CNOT4O95628 AL158032.1-201ENST00000605401 106 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 AC100812.1-201ENST00000607622 580 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 AC004696.1-201ENST00000614345 607 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 AC068724.3-201ENST00000625906 87 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 U3.53-201ENST00000628922 216 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.11□□□□□ -1.75
CNOT4O95628 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.11□□□□□ -1.75
CNOT4O95628 DDX10P1-201ENST00000448545 1933 ntBASIC4.11□□□□□ -1.75
CNOT4O95628 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.11□□□□□ -1.75
CNOT4O95628 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CNOT4O95628 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.11□□□□□ -1.75
CNOT4O95628 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CNOT4O95628 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.1□□□□□ -1.75
CNOT4O95628 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 OR56B2P-202ENST00000641377 2453 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AC106871.1-201ENST00000568324 3102 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 RNU1-115P-201ENST00000365329 160 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 Y_RNA.428-201ENST00000384078 102 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 Y_RNA.556-201ENST00000384677 113 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AP000567.1-201ENST00000406413 156 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.1□□□□□ -1.75
CNOT4O95628 USMG5P1-201ENST00000425964 177 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.1□□□□□ -1.75
CNOT4O95628 AC004975.1-201ENST00000428733 208 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.1□□□□□ -1.75
CNOT4O95628 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms