Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.28□□□□□ -2.2
POLR1AO95602 PMCHL2-203ENST00000457791 237 ntBASIC1.28□□□□□ -2.2
POLR1AO95602 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.28□□□□□ -2.2
POLR1AO95602 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.28□□□□□ -2.2
POLR1AO95602 AC019131.2-201ENST00000609071 870 ntBASIC1.28□□□□□ -2.2
POLR1AO95602 MIR8087-201ENST00000612745 78 ntBASIC1.28□□□□□ -2.2
POLR1AO95602 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.27□□□□□ -2.21
POLR1AO95602 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.27□□□□□ -2.21
POLR1AO95602 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
POLR1AO95602 AC116563.2-201ENST00000624751 535 ntBASIC1.27□□□□□ -2.21
POLR1AO95602 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
POLR1AO95602 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.27□□□□□ -2.21
POLR1AO95602 MTND5P9-201ENST00000503854 1755 ntBASIC1.27□□□□□ -2.21
POLR1AO95602 SNORA38-201ENST00000363946 132 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 RPL21P32-201ENST00000419877 477 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 RPL30P4-201ENST00000429309 333 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.26□□□□□ -2.21
POLR1AO95602 OR10V3P-201ENST00000525712 725 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 NIFKP8-201ENST00000560500 874 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.26□□□□□ -2.21
POLR1AO95602 AC103810.8-201ENST00000607347 118 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AC090970.3-201ENST00000612566 866 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AC005332.10-201ENST00000612725 619 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AC007785.2-201ENST00000598627 1916 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.26□□□□□ -2.21
POLR1AO95602 XKRYP1-201ENST00000423438 492 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.26□□□□□ -2.21
POLR1AO95602 XKRYP2-201ENST00000432915 492 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 JTBP1-201ENST00000441314 247 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 TRBV8-1-201ENST00000481590 279 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.26□□□□□ -2.21
POLR1AO95602 RNU6-928P-201ENST00000516876 104 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 CIR1P1-201ENST00000524055 1133 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 AP001486.3-201ENST00000615334 372 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
POLR1AO95602 AC109809.1-201ENST00000619665 545 ntBASIC1.26□□□□□ -2.21
POLR1AO95602 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.25□□□□□ -2.21
POLR1AO95602 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.25□□□□□ -2.21
POLR1AO95602 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
POLR1AO95602 Y_RNA.85-201ENST00000363014 111 ntBASIC1.25□□□□□ -2.21
POLR1AO95602 SNORD114-2-201ENST00000363953 78 ntBASIC1.25□□□□□ -2.21
POLR1AO95602 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
POLR1AO95602 AL022238.1-201ENST00000442557 355 ntBASIC1.25□□□□□ -2.21
POLR1AO95602 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.25□□□□□ -2.21
POLR1AO95602 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
POLR1AO95602 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.25□□□□□ -2.21
POLR1AO95602 AL627230.6-201ENST00000611129 280 ntBASIC1.25□□□□□ -2.21
POLR1AO95602 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.25□□□□□ -2.21
POLR1AO95602 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
POLR1AO95602 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.24□□□□□ -2.21
POLR1AO95602 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.24□□□□□ -2.21
POLR1AO95602 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.24□□□□□ -2.21
POLR1AO95602 SETP11-201ENST00000473027 690 ntBASIC1.24□□□□□ -2.21
POLR1AO95602 AC104806.1-201ENST00000508720 308 ntBASIC1.24□□□□□ -2.21
POLR1AO95602 BTF3P12-201ENST00000519620 469 ntBASIC1.24□□□□□ -2.21
POLR1AO95602 AC087272.1-201ENST00000523624 533 ntBASIC1.24□□□□□ -2.21
POLR1AO95602 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
POLR1AO95602 AC096656.1-201ENST00000623826 1364 ntBASIC1.24□□□□□ -2.21
POLR1AO95602 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
POLR1AO95602 RNU6-335P-201ENST00000364563 113 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 MTND4P11-201ENST00000417020 1058 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 UBE2V1P6-201ENST00000430840 422 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 RPS27AP10-201ENST00000496103 208 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 RN7SKP277-201ENST00000516895 283 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 AC003001.2-201ENST00000616294 831 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 Y_RNA.433-201ENST00000384089 102 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 OR6C66P-201ENST00000414917 930 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 RPL7P30-201ENST00000420888 709 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 AL356867.1-201ENST00000429623 299 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 AC016691.1-201ENST00000441321 413 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 RPL31P20-201ENST00000449593 360 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 RPS27P26-201ENST00000494583 239 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.23□□□□□ -2.21
POLR1AO95602 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.23□□□□□ -2.21
POLR1AO95602 AL590282.1-201ENST00000610379 1136 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 AC008669.1-201ENST00000565823 2178 ntBASIC1.23□□□□□ -2.21
POLR1AO95602 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
POLR1AO95602 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.22□□□□□ -2.21
POLR1AO95602 MT-TP-201ENST00000387461 68 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 MIR676-201ENST00000390702 67 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 RN7SKP200-201ENST00000410564 320 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 AC098592.2-201ENST00000413158 265 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 AL161449.1-201ENST00000414531 1199 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 AL591704.1-201ENST00000432574 275 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.22□□□□□ -2.21
POLR1AO95602 AC022447.3-201ENST00000506865 495 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
POLR1AO95602 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.22□□□□□ -2.21
POLR1AO95602 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.22□□□□□ -2.21
POLR1AO95602 AC096586.2-201ENST00000610260 441 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 AL109933.3-201ENST00000619095 188 ntBASIC1.22□□□□□ -2.21
POLR1AO95602 AC009902.3-201ENST00000606235 2172 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 RNU6-1331P-201ENST00000363658 106 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 Y_RNA.458-201ENST00000384240 102 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 CIR1P3-201ENST00000405137 479 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 RPL21P90-201ENST00000415692 466 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.21□□□□□ -2.22
POLR1AO95602 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.21□□□□□ -2.22
POLR1AO95602 RPS20P20-201ENST00000460498 340 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms