Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-289P-201ENST00000364093 107 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 SET-203ENST00000372688 801 ntTSL 2 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 TAS2R15P-201ENST00000390674 928 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 HIGD1AP15-201ENST00000416198 280 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 RPS15AP34-201ENST00000487776 387 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC093281.2-201ENST00000510153 597 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 RNU1-40P-201ENST00000516816 164 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 RNU1-97P-201ENST00000516872 164 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AMZ2P1-203ENST00000565833 850 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 VN1R82P-201ENST00000601481 356 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC022022.2-201ENST00000602989 360 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 AL357080.1-201ENST00000617394 239 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 AP002782.1-201ENST00000623107 614 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 AC011477.1-204ENST00000623416 1325 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDNEP1O95476 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTDNEP1O95476 ELF2P3-201ENST00000445099 1506 ntBASIC2.31□□□□□ -2.04
CTDNEP1O95476 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CTDNEP1O95476 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CTDNEP1O95476 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC008568.2-201ENST00000623862 2313 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AL391994.1-201ENST00000254724 282 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CTDNEP1O95476 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 RNU6-28P-201ENST00000362378 107 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 Y_RNA.234-201ENST00000364409 97 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AL356131.1-201ENST00000405826 414 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 DPH3P2-201ENST00000422618 250 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 MTCO2P5-201ENST00000422621 426 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 BX119904.4-201ENST00000424402 301 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 AL035407.1-201ENST00000429211 571 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CTDNEP1O95476 SDCBPP1-201ENST00000440192 890 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 MTCO1P27-201ENST00000448269 226 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 USP9YP10-201ENST00000454868 628 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 RNA5SP471-201ENST00000516971 106 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 Y_RNA.717-201ENST00000517106 92 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 OR6C7P-201ENST00000547875 934 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 CR383656.7-201ENST00000548164 174 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 AL596327.1-201ENST00000603629 213 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC068313.1-201ENST00000604028 1008 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 TUSC7.1-201ENST00000610969 165 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC021755.4-201ENST00000616620 456 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 AC009159.2-201ENST00000617603 606 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CTDNEP1O95476 DDX43P2-201ENST00000604753 1354 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 TPTE2P4-201ENST00000258589 1605 ntBASIC2.3□□□□□ -2.04
CTDNEP1O95476 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AL356473.1-201ENST00000406203 1408 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 RNU6-1200P-201ENST00000384162 107 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AL135786.1-201ENST00000415892 214 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AL606662.1-201ENST00000445763 553 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 RPL30P9-201ENST00000465586 330 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 MTND2P14-201ENST00000482139 351 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 ANXA2P1-201ENST00000505539 926 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 LTV1P1-201ENST00000510683 1237 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 OR5BM1P-201ENST00000512021 366 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 MTCYBP43-201ENST00000513621 740 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 RNU6-714P-201ENST00000516963 103 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 HMGB1P14-201ENST00000557424 591 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AL353778.1-201ENST00000603149 408 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms