Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC093010.3-201ENST00000570269 15214 ntBASIC3.42□□□□□ -1.86
RTN3O95197 UBE2L2-201ENST00000254302 429 ntBASIC3.42□□□□□ -1.86
RTN3O95197 RNU1-70P-201ENST00000362618 164 ntBASIC3.42□□□□□ -1.86
RTN3O95197 SMIM11P1-201ENST00000369586 178 ntBASIC3.42□□□□□ -1.86
RTN3O95197 SNORA20.2-201ENST00000383922 131 ntBASIC3.42□□□□□ -1.86
RTN3O95197 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RTN3O95197 AL139397.2-201ENST00000404529 772 ntBASIC3.42□□□□□ -1.86
RTN3O95197 RNA5SP344-201ENST00000411081 104 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AC099548.1-201ENST00000421443 426 ntBASIC3.42□□□□□ -1.86
RTN3O95197 OR2AS1P-201ENST00000427827 319 ntBASIC3.42□□□□□ -1.86
RTN3O95197 ELOCP14-201ENST00000428070 331 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.42□□□□□ -1.86
RTN3O95197 AC104850.1-201ENST00000435940 476 ntBASIC3.42□□□□□ -1.86
RTN3O95197 RPS24P1-201ENST00000438550 371 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AC073614.1-201ENST00000438690 650 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.42□□□□□ -1.86
RTN3O95197 ELOCP7-201ENST00000439968 331 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AL360221.1-201ENST00000445989 335 ntBASIC3.42□□□□□ -1.86
RTN3O95197 DDX3P2-201ENST00000446138 111 ntBASIC3.42□□□□□ -1.86
RTN3O95197 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.42□□□□□ -1.86
RTN3O95197 RNU6-953P-201ENST00000459154 107 ntBASIC3.42□□□□□ -1.86
RTN3O95197 RPL21P8-201ENST00000465083 535 ntBASIC3.42□□□□□ -1.86
RTN3O95197 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
RTN3O95197 ARL2BPP4-201ENST00000506854 471 ntBASIC3.42□□□□□ -1.86
RTN3O95197 RNA5SP471-201ENST00000516971 106 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.42□□□□□ -1.86
RTN3O95197 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.42□□□□□ -1.86
RTN3O95197 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.42□□□□□ -1.86
RTN3O95197 AC068135.2-201ENST00000569293 1028 ntBASIC3.42□□□□□ -1.86
RTN3O95197 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.42□□□□□ -1.86
RTN3O95197 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.42□□□□□ -1.86
RTN3O95197 AL358072.1-201ENST00000604156 575 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AL161798.1-201ENST00000604630 131 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AC007363.1-201ENST00000604736 620 ntBASIC3.42□□□□□ -1.86
RTN3O95197 FTX_3.1-201ENST00000610451 147 ntBASIC3.42□□□□□ -1.86
RTN3O95197 MIR8057-201ENST00000620957 69 ntBASIC3.42□□□□□ -1.86
RTN3O95197 AC007998.5-201ENST00000622938 237 ntBASIC3.42□□□□□ -1.86
RTN3O95197 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTN3O95197 CR848007.1-201ENST00000442354 1699 ntBASIC3.42□□□□□ -1.86
RTN3O95197 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RTN3O95197 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RTN3O95197 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
RTN3O95197 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.41□□□□□ -1.86
RTN3O95197 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTN3O95197 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 AC073343.1-201ENST00000328239 651 ntBASIC3.41□□□□□ -1.86
RTN3O95197 FTLP6-201ENST00000355274 422 ntBASIC3.41□□□□□ -1.86
RTN3O95197 RNU6-14P-201ENST00000384630 106 ntBASIC3.41□□□□□ -1.86
RTN3O95197 RPL21P3-201ENST00000395517 478 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.41□□□□□ -1.86
RTN3O95197 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 ISCA1P6-201ENST00000427740 390 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.41□□□□□ -1.86
RTN3O95197 ARPC3P1-201ENST00000437218 533 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 AC244505.5-201ENST00000443639 207 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC146507.2-201ENST00000460608 476 ntBASIC3.41□□□□□ -1.86
RTN3O95197 MTND4LP3-201ENST00000468320 276 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC104472.2-201ENST00000469035 601 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 ARL4AP2-201ENST00000507378 601 ntBASIC3.41□□□□□ -1.86
RTN3O95197 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 SNORA31.26-201ENST00000517250 137 ntBASIC3.41□□□□□ -1.86
RTN3O95197 HMGB1P41-201ENST00000520234 440 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC022616.3-201ENST00000523940 148 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.41□□□□□ -1.86
RTN3O95197 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.41□□□□□ -1.86
RTN3O95197 DNAJC8P1-201ENST00000554535 372 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.41□□□□□ -1.86
RTN3O95197 AP005136.1-201ENST00000579765 429 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC012493.2-201ENST00000595083 291 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC119751.7-201ENST00000600494 245 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC104763.2-201ENST00000604179 382 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC064872.1-201ENST00000604823 1072 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC109347.2-201ENST00000610220 349 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC004908.3-201ENST00000610248 625 ntBASIC3.41□□□□□ -1.86
RTN3O95197 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.41□□□□□ -1.86
RTN3O95197 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC084035.1-201ENST00000634543 607 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC090582.1-201ENST00000636321 199 ntBASIC3.41□□□□□ -1.86
RTN3O95197 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.41□□□□□ -1.86
RTN3O95197 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.41□□□□□ -1.86
RTN3O95197 AL390237.1-201ENST00000404226 1415 ntBASIC3.41□□□□□ -1.86
RTN3O95197 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
RTN3O95197 AL359693.1-201ENST00000614959 2407 ntBASIC3.41□□□□□ -1.86
RTN3O95197 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTN3O95197 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTN3O95197 API5P2-201ENST00000397055 1498 ntBASIC3.41□□□□□ -1.86
RTN3O95197 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
RTN3O95197 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RTN3O95197 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
RTN3O95197 RNU6-799P-201ENST00000363567 107 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms