Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 VPS26BP1-201ENST00000417155 755 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.38□□□□□ -2.35
USH2AO75445 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.38□□□□□ -2.35
USH2AO75445 AC015922.2-201ENST00000435593 184 ntBASIC0.38□□□□□ -2.35
USH2AO75445 AC009296.1-201ENST00000443146 155 ntBASIC0.38□□□□□ -2.35
USH2AO75445 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.38□□□□□ -2.35
USH2AO75445 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.38□□□□□ -2.35
USH2AO75445 NDUFS5P6-201ENST00000529136 295 ntBASIC0.38□□□□□ -2.35
USH2AO75445 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
USH2AO75445 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
USH2AO75445 OR5H6-203ENST00000642105 978 ntBASIC0.38□□□□□ -2.35
USH2AO75445 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.37□□□□□ -2.35
USH2AO75445 Y_RNA.228-201ENST00000364346 98 ntBASIC0.37□□□□□ -2.35
USH2AO75445 HSPE1P24-201ENST00000450782 238 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.37□□□□□ -2.35
USH2AO75445 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.37□□□□□ -2.35
USH2AO75445 MRPL42P6-201ENST00000486397 371 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.37□□□□□ -2.35
USH2AO75445 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.37□□□□□ -2.35
USH2AO75445 AC090897.2-201ENST00000581715 130 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC087045.1-201ENST00000605856 382 ntBASIC0.37□□□□□ -2.35
USH2AO75445 RNA5SP393-201ENST00000363423 117 ntBASIC0.37□□□□□ -2.35
USH2AO75445 RPL23AP47-201ENST00000408017 460 ntBASIC0.37□□□□□ -2.35
USH2AO75445 ARF4P4-201ENST00000439608 520 ntBASIC0.37□□□□□ -2.35
USH2AO75445 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.37□□□□□ -2.35
USH2AO75445 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.37□□□□□ -2.35
USH2AO75445 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.37□□□□□ -2.35
USH2AO75445 RNU6-351P-201ENST00000516097 100 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC113368.1-201ENST00000603736 382 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC103710.4-201ENST00000609301 899 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC073569.3-201ENST00000619055 682 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC073592.7-201ENST00000623659 507 ntBASIC0.37□□□□□ -2.35
USH2AO75445 RNU1-52P-201ENST00000384190 164 ntBASIC0.37□□□□□ -2.35
USH2AO75445 SNORA46.1-201ENST00000391069 153 ntBASIC0.37□□□□□ -2.35
USH2AO75445 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC104308.1-201ENST00000454621 333 ntBASIC0.37□□□□□ -2.35
USH2AO75445 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.37□□□□□ -2.35
USH2AO75445 RNA5SP364-201ENST00000516938 78 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.37□□□□□ -2.35
USH2AO75445 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.37□□□□□ -2.35
USH2AO75445 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.37□□□□□ -2.35
USH2AO75445 CYP2C61P-201ENST00000604072 290 ntBASIC0.37□□□□□ -2.35
USH2AO75445 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.37□□□□□ -2.35
USH2AO75445 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.36□□□□□ -2.35
USH2AO75445 AC074117.2-201ENST00000417130 397 ntBASIC0.36□□□□□ -2.35
USH2AO75445 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.36□□□□□ -2.35
USH2AO75445 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
USH2AO75445 SNORD97-201ENST00000459187 142 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.36□□□□□ -2.35
USH2AO75445 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
USH2AO75445 AL139344.1-201ENST00000605228 195 ntBASIC0.36□□□□□ -2.35
USH2AO75445 RNY4P6-201ENST00000363667 96 ntBASIC0.36□□□□□ -2.35
USH2AO75445 RNU6-1126P-201ENST00000384002 107 ntBASIC0.36□□□□□ -2.35
USH2AO75445 Y_RNA.514-201ENST00000384528 112 ntBASIC0.36□□□□□ -2.35
USH2AO75445 MTND2P16-201ENST00000419987 799 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AL606489.2-201ENST00000433886 234 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.36□□□□□ -2.35
USH2AO75445 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.36□□□□□ -2.35
USH2AO75445 MIR378F-201ENST00000578143 78 ntBASIC0.36□□□□□ -2.35
USH2AO75445 MIR144-201ENST00000384886 86 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.36□□□□□ -2.35
USH2AO75445 SDCBPP1-201ENST00000440192 890 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.36□□□□□ -2.35
USH2AO75445 RPL37P25-201ENST00000507308 276 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.36□□□□□ -2.35
USH2AO75445 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
USH2AO75445 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.36□□□□□ -2.35
USH2AO75445 AL136380.1-201ENST00000447970 162 ntBASIC0.36□□□□□ -2.35
USH2AO75445 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.36□□□□□ -2.35
USH2AO75445 AP004247.1-201ENST00000531556 1289 ntBASIC0.36□□□□□ -2.35
USH2AO75445 CYP4A27P-201ENST00000567218 190 ntBASIC0.36□□□□□ -2.35
USH2AO75445 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.36□□□□□ -2.35
USH2AO75445 AC090425.2-201ENST00000608818 501 ntBASIC0.36□□□□□ -2.35
USH2AO75445 AC007785.2-201ENST00000598627 1916 ntBASIC0.35□□□□□ -2.35
USH2AO75445 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.35□□□□□ -2.35
USH2AO75445 RNU2-41P-201ENST00000410991 178 ntBASIC0.35□□□□□ -2.35
USH2AO75445 RPS20P15-201ENST00000412792 311 ntBASIC0.35□□□□□ -2.35
USH2AO75445 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.35□□□□□ -2.35
USH2AO75445 MRPS33P3-201ENST00000513456 322 ntBASIC0.35□□□□□ -2.35
USH2AO75445 CASP1P1-201ENST00000526345 212 ntBASIC0.35□□□□□ -2.35
USH2AO75445 MIR6857-201ENST00000613267 93 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.35□□□□□ -2.35
USH2AO75445 AL390862.1-201ENST00000635467 1469 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC073614.1-201ENST00000438690 650 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.35□□□□□ -2.35
USH2AO75445 AL035407.2-201ENST00000454090 378 ntBASIC0.35□□□□□ -2.35
USH2AO75445 KLRA1P-201ENST00000503499 986 ntBASIC0.35□□□□□ -2.35
USH2AO75445 HMGB3P17-201ENST00000504195 649 ntBASIC0.35□□□□□ -2.35
USH2AO75445 MIR5194-201ENST00000582634 120 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC091057.2-201ENST00000602594 792 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC135178.6-201ENST00000605314 398 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC005741.1-201ENST00000511094 432 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.35□□□□□ -2.35
USH2AO75445 RSL24D1P11-201ENST00000591045 491 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AP006248.3-201ENST00000623580 594 ntBASIC0.35□□□□□ -2.35
USH2AO75445 SNORA36.1-201ENST00000363424 132 ntBASIC0.35□□□□□ -2.35
USH2AO75445 SSR1P1-201ENST00000407630 814 ntBASIC0.35□□□□□ -2.35
USH2AO75445 SNORD56-201ENST00000413522 71 ntBASIC0.35□□□□□ -2.35
USH2AO75445 AC023141.11-201ENST00000508864 202 ntBASIC0.35□□□□□ -2.35
USH2AO75445 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms