Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4BO75351 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS4BO75351 BDH2P1-201ENST00000602288 736 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC104763.2-201ENST00000604179 382 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC007619.2-201ENST00000605743 379 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AL132765.2-201ENST00000610812 351 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AL391261.4-201ENST00000616012 481 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4BO75351 MTND4P14-201ENST00000435799 1354 ntBASIC3.85□□□□□ -1.79
VPS4BO75351 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS4BO75351 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS4BO75351 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS4BO75351 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS4BO75351 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS4BO75351 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
VPS4BO75351 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS4BO75351 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS4BO75351 MAPK10-372ENST00000641954 3413 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS4BO75351 RNU6-1287P-201ENST00000362914 107 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RNU4-73P-201ENST00000363164 141 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RNU6-1060P-201ENST00000384664 107 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 MIR491-201ENST00000384877 84 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VPS4BO75351 RNU6-817P-201ENST00000391083 104 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RPL30P2-201ENST00000414021 291 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC083863.1-201ENST00000438811 231 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 NEFMP1-201ENST00000443423 1006 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS4BO75351 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS4BO75351 AL590639.1-201ENST00000456484 337 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RNU6-1208P-201ENST00000459588 107 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RPL21P8-201ENST00000465083 535 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC010285.1-201ENST00000470580 392 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 HSPE1P6-201ENST00000479457 291 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 VN1R104P-201ENST00000505115 1009 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS4BO75351 RNU7-30P-201ENST00000516835 62 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RN7SKP60-201ENST00000516985 239 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 RN7SKP256-201ENST00000517201 314 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS4BO75351 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS4BO75351 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS4BO75351 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS4BO75351 AC037471.2-201ENST00000564941 598 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS4BO75351 FAM60BP-201ENST00000578364 658 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS4BO75351 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS4BO75351 AL121757.2-201ENST00000611223 313 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS4BO75351 MIR6500-201ENST00000622700 86 ntBASIC3.84□□□□□ -1.79
VPS4BO75351 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS4BO75351 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS4BO75351 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
VPS4BO75351 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS4BO75351 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
VPS4BO75351 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS4BO75351 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS4BO75351 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS4BO75351 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS4BO75351 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS4BO75351 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS4BO75351 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS4BO75351 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 Y_RNA.356-201ENST00000365475 113 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS4BO75351 HSPE1P12-201ENST00000412576 301 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS4BO75351 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS4BO75351 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS4BO75351 AC008850.1-201ENST00000427546 362 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AL365400.1-201ENST00000431854 640 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS4BO75351 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS4BO75351 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS4BO75351 RNU7-66P-201ENST00000459469 62 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS4BO75351 Y_RNA.654-201ENST00000497848 106 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS4BO75351 TTC39CP1-201ENST00000512513 755 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 BTF3P12-201ENST00000519620 469 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AC105029.1-201ENST00000520250 669 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 RPL7P20-201ENST00000520308 745 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS4BO75351 AC022690.1-201ENST00000526681 550 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 RANP3-201ENST00000530970 276 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS4BO75351 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS4BO75351 AC091516.1-201ENST00000549191 703 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 OR11H5P-201ENST00000554039 926 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 MIR5583-1-201ENST00000580941 59 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 MIR4742-201ENST00000581069 85 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AC007179.3-201ENST00000604976 235 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 uc_338.5-201ENST00000611839 155 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 AC005858.4-201ENST00000623191 700 ntBASIC3.83□□□□□ -1.8
VPS4BO75351 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms