Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC007546.2-201ENST00000623996 360 ntBASIC5.48□□□□□ -1.53
PTCD1O75127 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTCD1O75127 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTCD1O75127 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
PTCD1O75127 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCD1O75127 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PTCD1O75127 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PTCD1O75127 RNU6-874P-201ENST00000362390 105 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RNU6-76P-201ENST00000384060 104 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RNU6-356P-201ENST00000384140 107 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 CTSL3P-202ENST00000412179 788 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RPL21P90-201ENST00000415692 466 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 AC097713.2-201ENST00000430199 356 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCD1O75127 RPL21P2-201ENST00000440049 481 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RPS26P2-201ENST00000440331 348 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RPL21P41-201ENST00000459863 264 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 AC009901.1-201ENST00000506703 541 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RNY3P15-201ENST00000516297 97 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RNA5SP384-201ENST00000516615 116 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCD1O75127 AC005951.2-201ENST00000576282 495 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.47□□□□□ -1.53
PTCD1O75127 MIR3128-201ENST00000581957 66 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCD1O75127 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.47□□□□□ -1.53
PTCD1O75127 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PTCD1O75127 PRO1804-201ENST00000623780 2050 ntBASIC5.47□□□□□ -1.53
PTCD1O75127 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.47□□□□□ -1.53
PTCD1O75127 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCD1O75127 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCD1O75127 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCD1O75127 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
PTCD1O75127 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCD1O75127 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
PTCD1O75127 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PTCD1O75127 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PTCD1O75127 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCD1O75127 RNA5SP307-201ENST00000362863 116 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 Y_RNA.80-201ENST00000362996 102 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 RNU6-1059P-201ENST00000363752 98 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 Y_RNA.428-201ENST00000384078 102 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 Y_RNA.485-201ENST00000384395 102 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCD1O75127 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCD1O75127 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCD1O75127 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCD1O75127 PRDX3P3-201ENST00000447765 522 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 IFNWP4-201ENST00000453148 294 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AC108751.2-201ENST00000469993 231 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PTCD1O75127 AC092436.3-201ENST00000511788 257 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 RNU2-53P-201ENST00000516257 147 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 SNORD116.3-201ENST00000517176 78 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 SNORA31.22-201ENST00000517204 135 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCD1O75127 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCD1O75127 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCD1O75127 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCD1O75127 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PTCD1O75127 MIR5692A1-201ENST00000580523 69 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AC011494.1-201ENST00000596454 237 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AC010201.1-201ENST00000605051 540 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AC098479.1-201ENST00000609225 154 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AC141273.2-201ENST00000618989 130 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AC138965.3-201ENST00000623875 498 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 SAMMSON-213ENST00000641336 1521 ntBASIC5.46□□□□□ -1.54
PTCD1O75127 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCD1O75127 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PTCD1O75127 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCD1O75127 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCD1O75127 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PTCD1O75127 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PTCD1O75127 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 Y_RNA.389-201ENST00000383924 113 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 MIR921-201ENST00000401133 56 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 SNORA74C-2-201ENST00000411179 201 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCD1O75127 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCD1O75127 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCD1O75127 AL392103.1-201ENST00000447000 198 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 HMGB3P30-201ENST00000457863 606 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 SNORD5.1-201ENST00000458800 75 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 ERHP1-201ENST00000523006 310 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCD1O75127 AC068446.3-201ENST00000555285 382 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 HMGB3P26-201ENST00000560051 582 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 MIR3910-1-201ENST00000580936 111 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PTCD1O75127 HMGB2P1-201ENST00000591146 634 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 AC004805.2-201ENST00000605382 482 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 MIR8062-201ENST00000621515 85 ntBASIC5.45□□□□□ -1.54
PTCD1O75127 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCD1O75127 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms