Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BX842559.1-201ENST00000419615 532 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC091390.3-201ENST00000426478 338 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.18□□□□□ -1.9
ZIC3O60481 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.18□□□□□ -1.9
ZIC3O60481 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.18□□□□□ -1.9
ZIC3O60481 RN7SL594P-201ENST00000470590 287 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.18□□□□□ -1.9
ZIC3O60481 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.18□□□□□ -1.9
ZIC3O60481 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.18□□□□□ -1.9
ZIC3O60481 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 RNA5SP503-201ENST00000517047 117 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 RNU6-685P-201ENST00000517088 95 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.18□□□□□ -1.9
ZIC3O60481 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 AC004024.1-201ENST00000549244 247 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AL138976.2-201ENST00000563989 694 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.18□□□□□ -1.9
ZIC3O60481 MTCO3P24-201ENST00000572729 782 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC103710.3-201ENST00000608157 948 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 RMST_3.1-201ENST00000611651 109 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 DISC2.1-201ENST00000612827 205 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AL391261.4-201ENST00000616012 481 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 uc_338.11-201ENST00000619132 160 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC010338.1-201ENST00000621823 717 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 U6.114-201ENST00000636407 96 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC099654.14-201ENST00000638599 341 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.18□□□□□ -1.9
ZIC3O60481 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZIC3O60481 AC103710.2-202ENST00000641454 2853 ntBASIC3.18□□□□□ -1.9
ZIC3O60481 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 RNU6-552P-201ENST00000362869 119 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 UBE2V1P2-201ENST00000397758 440 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 HSPE1P26-201ENST00000405341 275 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RN7SKP285-201ENST00000410137 318 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RNA5SP129-201ENST00000410276 118 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RNU2-29P-201ENST00000410423 189 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 OR9R1P-201ENST00000412200 877 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 Z85995.1-201ENST00000415547 335 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RPL30P16-201ENST00000419341 429 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
ZIC3O60481 AL109913.1-201ENST00000421173 514 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.17□□□□□ -1.9
ZIC3O60481 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.17□□□□□ -1.9
ZIC3O60481 CALM1P1-201ENST00000442082 433 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.17□□□□□ -1.9
ZIC3O60481 AC087588.1-201ENST00000462203 316 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RPL31P60-201ENST00000478450 367 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC025518.1-201ENST00000479856 347 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RBBP4P6-201ENST00000508098 202 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC074344.1-201ENST00000512823 224 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 RNA5SP468-201ENST00000516782 93 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AP006245.1-201ENST00000522549 120 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 SUB1P1-201ENST00000524415 382 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.17□□□□□ -1.9
ZIC3O60481 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.17□□□□□ -1.9
ZIC3O60481 HIF1AP1-201ENST00000553642 175 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AL121576.1-201ENST00000556055 276 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.17□□□□□ -1.9
ZIC3O60481 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.17□□□□□ -1.9
ZIC3O60481 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.17□□□□□ -1.9
ZIC3O60481 AL035413.2-201ENST00000604801 525 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC110741.2-201ENST00000605278 268 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC012409.4-201ENST00000612923 249 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.17□□□□□ -1.9
ZIC3O60481 DUXAP9-208ENST00000622815 614 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.17□□□□□ -1.9
ZIC3O60481 MIR3662-201ENST00000637030 95 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 MTND5P42-201ENST00000637720 498 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 OTUD4P1-201ENST00000237841 3067 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 AL354685.2-201ENST00000448218 1447 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AL049781.1-201ENST00000623195 3585 ntBASIC3.17□□□□□ -1.9
ZIC3O60481 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZIC3O60481 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZIC3O60481 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.16□□□□□ -1.9
ZIC3O60481 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 RIOK3P1-201ENST00000418778 1528 ntBASIC3.16□□□□□ -1.9
ZIC3O60481 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZIC3O60481 MIR423-201ENST00000362201 94 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms