Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RN7SKP32-201ENST00000410167 303 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 RNA5SP129-201ENST00000410276 118 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 RNU6-1148P-201ENST00000410992 104 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 BX323014.1-201ENST00000412876 237 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 RPS15AP12-201ENST00000419498 388 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 ELOCP4-201ENST00000420090 333 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 MTND2P23-201ENST00000422990 651 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 MTCO3P46-201ENST00000425787 232 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC006989.1-201ENST00000427212 131 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC096632.1-201ENST00000427395 310 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC006946.1-201ENST00000429106 328 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 GPR143P-201ENST00000434155 205 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
SMAD6O43541 NIPA2P5-201ENST00000452282 464 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AP1S2P1-201ENST00000457344 379 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 snoU13.22-201ENST00000459428 104 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 PLGLA-201ENST00000465668 449 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SMAD6O43541 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 HSPD1P15-201ENST00000505573 1122 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 AC026784.1-201ENST00000507986 352 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC021146.1-201ENST00000511202 716 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 PSMA2P1-201ENST00000526365 646 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AP003072.2-201ENST00000527756 676 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.52□□□□□ -1.85
SMAD6O43541 HMGB1P6-201ENST00000569046 646 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 MIR3944-201ENST00000581277 108 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.52□□□□□ -1.85
SMAD6O43541 uc_338.5-201ENST00000611839 155 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AL354950.2-201ENST00000617939 290 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SMAD6O43541 AC090617.10-201ENST00000624308 134 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.52□□□□□ -1.85
SMAD6O43541 RIOK3P1-201ENST00000418778 1528 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 AC118273.1-201ENST00000525324 3006 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMAD6O43541 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
SMAD6O43541 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMAD6O43541 AL049781.1-201ENST00000623195 3585 ntBASIC3.52□□□□□ -1.85
SMAD6O43541 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMAD6O43541 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD6O43541 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD6O43541 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD6O43541 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD6O43541 RNU6-50P-201ENST00000362356 103 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNU6-28P-201ENST00000362378 107 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNU6-1097P-201ENST00000363586 107 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNY1P12-201ENST00000364251 105 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNA5SP235-201ENST00000365411 114 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 SNORA32.2-201ENST00000384049 122 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AL024474.1-201ENST00000404655 591 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD6O43541 AC127526.1-201ENST00000417526 366 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD6O43541 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD6O43541 SAR1AP4-201ENST00000429225 591 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD6O43541 AC024082.2-201ENST00000434771 238 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RPS29P31-201ENST00000446147 164 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC007967.1-201ENST00000455422 1159 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNU7-63P-201ENST00000459054 62 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RPL21P10-201ENST00000463521 490 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
SMAD6O43541 EIF4EP3-201ENST00000498782 656 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD6O43541 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD6O43541 TXNP6-201ENST00000510190 310 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC074250.1-201ENST00000511117 192 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC010265.1-201ENST00000513509 211 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD6O43541 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.51□□□□□ -1.85
SMAD6O43541 RNU2-27P-201ENST00000516185 142 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 SCARNA24.1-201ENST00000516465 137 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 SNORD60.2-201ENST00000516883 86 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 RNA5SP337-201ENST00000517007 109 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 BTF3P12-201ENST00000519620 469 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 SUB1P1-201ENST00000524415 382 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 OR4R1P-201ENST00000529879 463 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD6O43541 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD6O43541 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD6O43541 AL360085.1-201ENST00000604713 532 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD6O43541 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD6O43541 AC079597.1-201ENST00000624306 508 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SMAD6O43541 MTND5P33-201ENST00000571250 1450 ntBASIC3.51□□□□□ -1.85
SMAD6O43541 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
SMAD6O43541 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD6O43541 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms