Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AP000542.2-201ENST00000623199 6179 ntBASIC4.02□□□□□ -1.77
PAX4O43316 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PAX4O43316 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.02□□□□□ -1.77
PAX4O43316 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PAX4O43316 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PAX4O43316 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.01□□□□□ -1.77
PAX4O43316 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.01□□□□□ -1.77
PAX4O43316 AL121950.1-201ENST00000624993 2077 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 AC011933.2-201ENST00000578539 2790 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-766P-201ENST00000362478 107 ntBASIC4.01□□□□□ -1.77
PAX4O43316 Y_RNA.101-201ENST00000363154 102 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-508P-201ENST00000363231 103 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNA5SP500-201ENST00000364486 119 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-384P-201ENST00000364900 104 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-756P-201ENST00000383997 107 ntBASIC4.01□□□□□ -1.77
PAX4O43316 MIR135A2-201ENST00000384854 100 ntBASIC4.01□□□□□ -1.77
PAX4O43316 MIR487A-201ENST00000385009 80 ntBASIC4.01□□□□□ -1.77
PAX4O43316 Y_RNA.584-201ENST00000391090 114 ntBASIC4.01□□□□□ -1.77
PAX4O43316 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.01□□□□□ -1.77
PAX4O43316 MTHFD2P2-201ENST00000407725 247 ntBASIC4.01□□□□□ -1.77
PAX4O43316 SNORA11.5-201ENST00000408163 128 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU4-65P-201ENST00000410473 140 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AC006028.1-201ENST00000438379 402 ntBASIC4.01□□□□□ -1.77
PAX4O43316 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.01□□□□□ -1.77
PAX4O43316 AC009296.1-201ENST00000443146 155 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 ABCC13-202ENST00000463099 3842 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AL121594.1-201ENST00000475906 575 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 AL671862.1-201ENST00000515851 349 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-1146P-201ENST00000516282 102 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-504P-201ENST00000516568 104 ntBASIC4.01□□□□□ -1.77
PAX4O43316 RNU6-1007P-201ENST00000516586 107 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.01□□□□□ -1.77
PAX4O43316 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.01□□□□□ -1.77
PAX4O43316 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 MIR4504-201ENST00000577413 92 ntBASIC4.01□□□□□ -1.77
PAX4O43316 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.01□□□□□ -1.77
PAX4O43316 NF1P5-201ENST00000588287 448 ntBASIC4.01□□□□□ -1.77
PAX4O43316 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.01□□□□□ -1.77
PAX4O43316 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PAX4O43316 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PAX4O43316 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.01□□□□□ -1.77
PAX4O43316 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.01□□□□□ -1.77
PAX4O43316 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PAX4O43316 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PAX4O43316 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
PAX4O43316 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
PAX4O43316 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.01□□□□□ -1.77
PAX4O43316 SMG1P4-204ENST00000523028 4131 ntBASIC4.01□□□□□ -1.77
PAX4O43316 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PAX4O43316 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4□□□□□ -1.77
PAX4O43316 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PAX4O43316 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4□□□□□ -1.77
PAX4O43316 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4□□□□□ -1.77
PAX4O43316 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4□□□□□ -1.77
PAX4O43316 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4□□□□□ -1.77
PAX4O43316 DDX10P1-201ENST00000448545 1933 ntBASIC4□□□□□ -1.77
PAX4O43316 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4□□□□□ -1.77
PAX4O43316 AL159987.1-201ENST00000347911 293 ntBASIC4□□□□□ -1.77
PAX4O43316 RNU1-150P-201ENST00000362491 162 ntBASIC4□□□□□ -1.77
PAX4O43316 Y_RNA.230-201ENST00000364348 109 ntBASIC4□□□□□ -1.77
PAX4O43316 RNU1-136P-201ENST00000384181 164 ntBASIC4□□□□□ -1.77
PAX4O43316 RNU6-729P-201ENST00000384399 107 ntBASIC4□□□□□ -1.77
PAX4O43316 Y_RNA.534-201ENST00000384599 112 ntBASIC4□□□□□ -1.77
PAX4O43316 MIR130A-201ENST00000385274 89 ntBASIC4□□□□□ -1.77
PAX4O43316 MT-TT-201ENST00000387460 66 ntBASIC4□□□□□ -1.77
PAX4O43316 RNU6-440P-201ENST00000390882 105 ntBASIC4□□□□□ -1.77
PAX4O43316 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4□□□□□ -1.77
PAX4O43316 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4□□□□□ -1.77
PAX4O43316 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4□□□□□ -1.77
PAX4O43316 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4□□□□□ -1.77
PAX4O43316 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4□□□□□ -1.77
PAX4O43316 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4□□□□□ -1.77
PAX4O43316 AC245047.8-201ENST00000456455 284 ntBASIC4□□□□□ -1.77
PAX4O43316 NXT1P1-201ENST00000458481 316 ntBASIC4□□□□□ -1.77
PAX4O43316 Y_RNA.649-201ENST00000459077 103 ntBASIC4□□□□□ -1.77
PAX4O43316 AC005532.2-201ENST00000467154 373 ntBASIC4□□□□□ -1.77
PAX4O43316 AC053481.1-201ENST00000467217 306 ntBASIC4□□□□□ -1.77
PAX4O43316 RPS17P15-201ENST00000475609 349 ntBASIC4□□□□□ -1.77
PAX4O43316 RPL23AP45-201ENST00000476406 468 ntBASIC4□□□□□ -1.77
PAX4O43316 RPL23AP49-201ENST00000492925 468 ntBASIC4□□□□□ -1.77
PAX4O43316 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4□□□□□ -1.77
PAX4O43316 GLUD1P3-202ENST00000508551 200 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms