Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RAC1P6-201ENST00000423911 575 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 RPL7P46-201ENST00000425129 740 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.66□□□□□ -1.66
SRGAP3O43295 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.66□□□□□ -1.66
SRGAP3O43295 AL160004.2-201ENST00000432935 350 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.66□□□□□ -1.66
SRGAP3O43295 AC007389.2-201ENST00000434630 306 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AF228730.2-201ENST00000438784 848 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AL356535.1-201ENST00000440335 398 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC002553.2-201ENST00000453217 340 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.66□□□□□ -1.66
SRGAP3O43295 AC017037.2-201ENST00000513850 890 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.66□□□□□ -1.66
SRGAP3O43295 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.66□□□□□ -1.66
SRGAP3O43295 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 AC004817.2-201ENST00000561794 651 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 MIR4680-201ENST00000580906 66 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC024619.4-201ENST00000580924 316 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.66□□□□□ -1.66
SRGAP3O43295 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.66□□□□□ -1.66
SRGAP3O43295 AC244505.7-201ENST00000599675 272 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 HMGB1P50-201ENST00000605814 607 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC012409.4-201ENST00000612923 249 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AL357559.1-201ENST00000622228 274 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.66□□□□□ -1.66
SRGAP3O43295 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 API5P2-201ENST00000397055 1498 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 AC027287.1-201ENST00000553115 1453 ntBASIC4.66□□□□□ -1.66
SRGAP3O43295 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.66□□□□□ -1.66
SRGAP3O43295 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
SRGAP3O43295 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SRGAP3O43295 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SRGAP3O43295 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SRGAP3O43295 AC011978.2-201ENST00000569835 2054 ntBASIC4.65□□□□□ -1.66
SRGAP3O43295 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SRGAP3O43295 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SRGAP3O43295 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SRGAP3O43295 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SRGAP3O43295 RNU6-82P-201ENST00000363970 107 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 Y_RNA.452-201ENST00000384202 108 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 Y_RNA.482-201ENST00000384377 111 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 SNORD3H-201ENST00000384486 214 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 RNA5SP424-201ENST00000390988 115 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 RNU4-46P-201ENST00000410818 138 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 SKA2P1-201ENST00000425592 390 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 MTCYBP9-201ENST00000431021 303 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.65□□□□□ -1.67
SRGAP3O43295 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.65□□□□□ -1.67
SRGAP3O43295 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.65□□□□□ -1.67
SRGAP3O43295 MTATP8P1-201ENST00000467115 207 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 UBE2CP3-201ENST00000502715 450 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.65□□□□□ -1.67
SRGAP3O43295 RNU6-976P-201ENST00000516086 111 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 RNU6-189P-201ENST00000516120 101 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 RNU6-27P-201ENST00000516146 107 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.65□□□□□ -1.67
SRGAP3O43295 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.65□□□□□ -1.67
SRGAP3O43295 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.65□□□□□ -1.67
SRGAP3O43295 AC008269.2-201ENST00000561915 1105 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 AC020914.4-201ENST00000597690 277 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 AP001486.3-201ENST00000615334 372 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SRGAP3O43295 AC039056.2-201ENST00000622261 511 ntBASIC4.65□□□□□ -1.67
SRGAP3O43295 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.65□□□□□ -1.67
SRGAP3O43295 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SRGAP3O43295 TPTE2P4-201ENST00000258589 1605 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRGAP3O43295 MFSD8-236ENST00000641509 4050 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SRGAP3O43295 Y_RNA.212-201ENST00000364177 102 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RNU6-1318P-201ENST00000365389 103 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RNU6-310P-201ENST00000384655 107 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RNA5SP219-201ENST00000390940 113 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 U3.29-201ENST00000391296 212 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RNU6ATAC-201ENST00000408749 126 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RNU6-954P-201ENST00000411355 107 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RNU6-516P-201ENST00000411381 104 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 RPL30P2-201ENST00000414021 291 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.64□□□□□ -1.67
SRGAP3O43295 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.64□□□□□ -1.67
SRGAP3O43295 RPS15AP40-201ENST00000419621 391 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 EZH2P1-201ENST00000431167 291 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.64□□□□□ -1.67
SRGAP3O43295 RPL36AP6-201ENST00000435770 321 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AL035666.1-201ENST00000446195 348 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AC104058.1-201ENST00000448028 297 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.64□□□□□ -1.67
SRGAP3O43295 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.64□□□□□ -1.67
SRGAP3O43295 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SRGAP3O43295 AC108078.2-201ENST00000510750 236 ntBASIC4.64□□□□□ -1.67
SRGAP3O43295 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.64□□□□□ -1.67
SRGAP3O43295 AC135001.1-201ENST00000544546 283 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms