Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 SNORA16.1-201ENST00000364597 132 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 RNU1-133P-201ENST00000364867 167 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 RNU6-1226P-201ENST00000384317 107 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC005345.1-201ENST00000431868 217 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AL359273.1-201ENST00000510918 627 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 ARL2BPP5-201ENST00000523141 481 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 MIR3921-201ENST00000577308 85 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 MIR5694-201ENST00000581190 76 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC113368.1-201ENST00000603736 382 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AL356585.4-201ENST00000623078 1229 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 RNU6-263P-201ENST00000363811 107 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 RNU6-560P-201ENST00000364007 108 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 RNU6-173P-201ENST00000364215 104 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 SNORD116-12-201ENST00000384468 92 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 SFR1P2-201ENST00000421841 730 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 HSFY7P-201ENST00000432672 318 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 HSFY8P-201ENST00000437934 318 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 OR10R1P-201ENST00000441524 1141 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 HMGN2P21-201ENST00000447764 270 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 HSFY5P-201ENST00000453726 309 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 snoU13.3-201ENST00000459441 104 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC139103.1-201ENST00000534696 1030 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 MIR4504-201ENST00000577413 92 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 OR4K8P-201ENST00000578842 1048 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AP002802.2-201ENST00000605877 235 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC104763.3-201ENST00000613765 618 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 MIR6076-201ENST00000617521 113 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC007275.1-201ENST00000621243 671 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC104985.3-201ENST00000623479 597 ntBASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL6A6A6NMZ7 AC090740.1-201ENST00000623193 2262 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNU5B-4P-201ENST00000363508 111 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNU6-629P-201ENST00000384061 103 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 U6.112-201ENST00000384129 70 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNU6-921P-201ENST00000384361 107 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNU6-549P-201ENST00000384433 107 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNY1P4-201ENST00000384595 115 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 SNORD65.1-201ENST00000390889 71 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL121978.1-201ENST00000402778 359 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNU2-25P-201ENST00000411041 191 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 Z75741.2-201ENST00000417272 1167 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL445687.1-201ENST00000439946 251 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RAB11AP1-201ENST00000442978 646 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC104108.1-201ENST00000509930 412 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC008127.2-201ENST00000549925 1075 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 DNAJC8P1-201ENST00000554535 372 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 MED28P6-201ENST00000558776 231 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 MIR4446-201ENST00000578505 67 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL158050.2-201ENST00000605336 568 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC068944.2-201ENST00000610373 403 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL355810.1-201ENST00000614629 552 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL157770.1-201ENST00000623049 439 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AC006963.1-201ENST00000624003 1052 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 RNU6-236P-201ENST00000363886 106 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 DSTNP4-201ENST00000399472 474 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 AL603865.2-201ENST00000401679 213 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 MTND4P3-201ENST00000417829 541 ntBASIC1.28□□□□□ -2.2
COL6A6A6NMZ7 DPRXP1-201ENST00000426312 460 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms