Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.35□□□□□ -2.19
RGPD3A6NKT7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.35□□□□□ -2.19
RGPD3A6NKT7 HSPE1P4-201ENST00000550617 308 ntBASIC1.35□□□□□ -2.19
RGPD3A6NKT7 AC007742.2-201ENST00000618226 398 ntBASIC1.35□□□□□ -2.19
RGPD3A6NKT7 AC109454.4-201ENST00000623411 649 ntBASIC1.35□□□□□ -2.19
RGPD3A6NKT7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
RGPD3A6NKT7 MIR330-201ENST00000362196 94 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 SNORA62.1-201ENST00000364287 154 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 MIR767-201ENST00000390228 109 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AL512604.1-201ENST00000404812 257 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.34□□□□□ -2.19
RGPD3A6NKT7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AC010099.1-201ENST00000455434 375 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AC105245.1-201ENST00000581934 244 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 HSPE1P7-201ENST00000604681 321 ntBASIC1.34□□□□□ -2.19
RGPD3A6NKT7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.34□□□□□ -2.2
RGPD3A6NKT7 RNU11-5P-201ENST00000391216 129 ntBASIC1.34□□□□□ -2.2
RGPD3A6NKT7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.34□□□□□ -2.2
RGPD3A6NKT7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.34□□□□□ -2.2
RGPD3A6NKT7 SNRPGP16-201ENST00000533275 226 ntBASIC1.34□□□□□ -2.2
RGPD3A6NKT7 AL109918.3-201ENST00000603072 338 ntBASIC1.34□□□□□ -2.2
RGPD3A6NKT7 AC106052.1-201ENST00000608029 497 ntBASIC1.34□□□□□ -2.2
RGPD3A6NKT7 MIR6857-201ENST00000613267 93 ntBASIC1.34□□□□□ -2.2
RGPD3A6NKT7 UCA1.1-201ENST00000620952 75 ntBASIC1.34□□□□□ -2.2
RGPD3A6NKT7 MIR193B-201ENST00000384907 83 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.33□□□□□ -2.2
RGPD3A6NKT7 NEFMP1-201ENST00000443423 1006 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AL357134.1-201ENST00000445848 426 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AL500527.1-201ENST00000448532 255 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.33□□□□□ -2.2
RGPD3A6NKT7 MIR1273G-201ENST00000577677 100 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AP005137.2-201ENST00000609238 400 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AC109809.1-201ENST00000619665 545 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AC010487.4-201ENST00000637027 61 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 AL390862.1-201ENST00000635467 1469 ntBASIC1.33□□□□□ -2.2
RGPD3A6NKT7 RNU6-37P-201ENST00000362692 107 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 RNA5SP62-201ENST00000363457 110 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 RNU6-11P-201ENST00000364234 107 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.32□□□□□ -2.2
RGPD3A6NKT7 RPS27P26-201ENST00000494583 239 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.32□□□□□ -2.2
RGPD3A6NKT7 RNA5SP476-201ENST00000516613 103 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.32□□□□□ -2.2
RGPD3A6NKT7 MIR4529-201ENST00000578110 78 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 AC092474.3-201ENST00000603022 568 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.32□□□□□ -2.2
RGPD3A6NKT7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RGPD3A6NKT7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 CR848007.1-201ENST00000442354 1699 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 AL589743.1-201ENST00000551932 2712 ntBASIC1.32□□□□□ -2.2
RGPD3A6NKT7 U8.3-201ENST00000363321 132 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 RNU4-42P-201ENST00000364738 142 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AP002784.2-201ENST00000397300 549 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 COX6CP18-201ENST00000448769 222 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 CASP1P1-201ENST00000526345 212 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC115085.1-201ENST00000588924 229 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC008749.1-201ENST00000597650 306 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AL355297.2-201ENST00000604792 129 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AL009028.1-201ENST00000604895 802 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC015849.6-201ENST00000605454 474 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC096772.1-201ENST00000609146 564 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC004383.1-201ENST00000438135 289 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 PABPC1P3-201ENST00000469174 459 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC105313.1-201ENST00000509121 353 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AP004247.1-201ENST00000531556 1289 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 MIR548Y-201ENST00000582739 110 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC073111.2-201ENST00000605657 1075 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC091932.3-201ENST00000624223 323 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 AC068620.4-201ENST00000636730 1182 ntBASIC1.31□□□□□ -2.2
RGPD3A6NKT7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RGPD3A6NKT7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RGPD3A6NKT7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 SNORD114-23-201ENST00000363536 72 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 RPS15AP40-201ENST00000419621 391 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.3□□□□□ -2.2
RGPD3A6NKT7 CBX3P6-201ENST00000430257 527 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AL353689.1-201ENST00000438895 199 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.3□□□□□ -2.2
RGPD3A6NKT7 RPL23AP3-201ENST00000453844 468 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AC055731.1-201ENST00000474387 401 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AP005597.4-201ENST00000526762 229 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 MIR3973-201ENST00000579824 107 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.3□□□□□ -2.2
RGPD3A6NKT7 AL590095.2-201ENST00000604136 117 ntBASIC1.3□□□□□ -2.2
RGPD3A6NKT7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms