Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 NUTF2P7-201ENST00000453086 375 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 SNORA70.14-201ENST00000516205 110 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 SNORA70.16-201ENST00000516390 95 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 OR5D17P-201ENST00000531492 978 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC007224.1-201ENST00000564410 144 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 MIR4738-201ENST00000579134 87 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 FGF7P1-201ENST00000582820 288 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 KLKP1-201ENST00000595979 403 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC005261.5-201ENST00000596280 355 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC022893.3-201ENST00000607665 437 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 MIR6500-201ENST00000622700 86 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AC090617.10-201ENST00000624308 134 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 CEP170P1-201ENST00000502249 4587 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC073073.2-201ENST00000609827 2578 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 Y_RNA.100-201ENST00000363141 102 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-82P-201ENST00000363970 107 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL592114.1-201ENST00000403842 483 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 RNU4-26P-201ENST00000410270 107 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 RNU2-71P-201ENST00000411395 189 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL591704.1-201ENST00000432574 275 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 TRBV1-201ENST00000476502 284 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC022695.1-201ENST00000522089 237 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 PSMA3P-201ENST00000555485 635 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 MIR3690-201ENST00000580266 75 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL020997.2-201ENST00000602607 184 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL670379.4-201ENST00000605279 254 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AL158032.1-201ENST00000605401 106 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 AC006023.2-201ENST00000609916 167 ntBASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PCDHA3Q9Y5H8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-797P-201ENST00000363101 109 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-288P-201ENST00000363690 104 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-522P-201ENST00000364497 107 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 U3.12-201ENST00000364498 214 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-116P-201ENST00000384042 109 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP317-201ENST00000410176 116 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 Y_RNA.615-201ENST00000410769 117 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP311-201ENST00000411290 116 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC080125.1-201ENST00000414888 684 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC092809.3-201ENST00000415453 231 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 MTCO3P46-201ENST00000425787 232 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AL591212.2-201ENST00000433923 257 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC104058.1-201ENST00000448028 297 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC007547.1-201ENST00000462177 490 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RPS20P22-201ENST00000473700 357 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP315-201ENST00000516340 116 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP312-201ENST00000517068 116 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC002545.1-201ENST00000592511 181 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC090132.2-201ENST00000615881 347 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 ZYXP1-201ENST00000617638 118 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AL136221.1-201ENST00000621449 509 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 AC066616.2-201ENST00000559334 1481 ntBASIC3.91□□□□□ -1.78
PCDHA3Q9Y5H8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms