Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB1Q9Y5F3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 MAPK10-373ENST00000641983 6772 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 USP8P1-201ENST00000494673 3183 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.142-201ENST00000363491 102 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-82P-201ENST00000363970 107 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 SNORA73.2-201ENST00000364946 201 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-116P-201ENST00000384042 109 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 MIR3074-201ENST00000384885 81 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 MTCO3P46-201ENST00000425787 232 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AL691449.1-201ENST00000426570 421 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 SNRPGP5-201ENST00000456003 220 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC243972.3-201ENST00000539655 198 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC091516.1-201ENST00000549191 703 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC002545.1-201ENST00000592511 181 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC012468.1-201ENST00000604888 430 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC103858.2-201ENST00000621471 543 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 C2orf27A-204ENST00000623058 969 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AC005858.4-201ENST00000623191 700 ntBASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB1Q9Y5F3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 ZNF962P-201ENST00000443465 3140 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 XGY1-201ENST00000381172 446 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 RN7SKP32-201ENST00000410167 303 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 RPS12P24-201ENST00000412619 387 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 RAB9AP3-201ENST00000412737 573 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC011742.1-201ENST00000431448 434 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AL591212.2-201ENST00000433923 257 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 VDAC1P3-201ENST00000434069 851 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AF228730.2-201ENST00000438784 848 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 RAB9AP1-201ENST00000449393 573 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 HPRT1P3-201ENST00000539521 576 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC106782.4-201ENST00000568264 210 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 MIR4795-201ENST00000584182 89 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 VN1R80P-201ENST00000597126 338 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AL139395.1-201ENST00000603662 160 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC006023.2-201ENST00000609916 167 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC009248.2-201ENST00000619826 254 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AL354798.1-201ENST00000622505 329 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AC090617.10-201ENST00000624308 134 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 OR4G2P-202ENST00000641004 1759 ntBASIC3.97□□□□□ -1.77
PCDHB1Q9Y5F3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.96□□□□□ -1.77
PCDHB1Q9Y5F3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PCDHB1Q9Y5F3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-288P-201ENST00000363690 104 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 SNORA32.2-201ENST00000384049 122 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 HSPE1P8-201ENST00000406997 288 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 RNU2-71P-201ENST00000411395 189 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 PDCL2P1-201ENST00000419302 352 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL590383.1-201ENST00000428602 75 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC104058.1-201ENST00000448028 297 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 PRSS3P4-201ENST00000453323 162 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms