Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AF131215.7-201ENST00000602443 707 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC136601.2-201ENST00000604356 474 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AL022161.1-201ENST00000604390 213 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC108747.1-201ENST00000609508 535 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC245517.5-201ENST00000611529 162 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC009159.1-201ENST00000618386 642 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC010149.2-201ENST00000637608 315 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 AC092447.7-201ENST00000422212 1621 ntBASIC2.74□□□□□ -1.97
ATG4BQ9Y4P1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 RNU1-35P-201ENST00000362782 153 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 Z99497.1-201ENST00000421282 135 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AL139281.1-201ENST00000422120 335 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 TIMM9P1-201ENST00000436122 256 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 RPS29P26-201ENST00000477483 171 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AP000797.1-201ENST00000478870 387 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 RN7SL499P-201ENST00000481141 276 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC112204.1-201ENST00000502591 103 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC138853.1-201ENST00000503549 823 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 ARL4AP2-201ENST00000507378 601 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 MTND5P13-201ENST00000513046 1079 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC022616.6-201ENST00000520479 119 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 SUB1P1-201ENST00000524415 382 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC007115.1-201ENST00000546853 234 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC107016.2-201ENST00000547968 190 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 MIR5697-201ENST00000578045 78 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 LARP7P3-201ENST00000579888 337 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC083760.1-201ENST00000589621 670 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC092354.1-201ENST00000606057 376 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AL031775.1-201ENST00000607014 887 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 FTX_3.1-201ENST00000610451 147 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC069234.5-201ENST00000611056 416 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC078883.4-201ENST00000623218 367 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC068057.2-201ENST00000624047 895 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 AC110079.1-202ENST00000635213 138 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.73□□□□□ -1.97
ATG4BQ9Y4P1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 RNU6-140P-201ENST00000384566 108 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 MIR888-201ENST00000401186 77 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AL359634.1-202ENST00000404721 284 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 USP9YP13-201ENST00000417797 480 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 BTF3L4P3-201ENST00000418879 476 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 COTL1P1-201ENST00000422309 375 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC104332.2-201ENST00000429959 156 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC244035.1-201ENST00000430042 390 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC107083.1-201ENST00000439643 279 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 RPL23AP58-201ENST00000440453 469 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 UBE2D3P4-201ENST00000441973 436 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 MTND4LP3-201ENST00000468320 276 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 KC877373.1-201ENST00000479066 408 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 BET1P1-201ENST00000482276 359 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC083906.5-201ENST00000503722 328 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 RN7SKP258-201ENST00000517151 304 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC007834.2-201ENST00000536310 343 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC068135.2-201ENST00000569293 1028 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 MIR548AB-201ENST00000584917 84 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 DPPA3P3-201ENST00000603842 430 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC121334.2-201ENST00000605387 271 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AL020991.1-201ENST00000612314 373 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC104010.1-201ENST00000616889 150 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC006386.2-201ENST00000624491 75 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AC012005.1-201ENST00000624575 75 ntBASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
ATG4BQ9Y4P1 AL359693.1-201ENST00000614959 2407 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 RNY4P16-201ENST00000364768 94 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 RNU5E-5P-201ENST00000365379 116 ntBASIC2.71□□□□□ -1.98
ATG4BQ9Y4P1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms