Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
HDGFL3Q9Y3E1 AC004520.1-201ENST00000608362 1413 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RNU6-884P-201ENST00000363889 107 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RNA5SP88-201ENST00000365560 109 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RNU6-207P-201ENST00000384137 107 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RNU2-2P-201ENST00000410396 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AL030996.1-201ENST00000411430 235 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 MTCO2P5-201ENST00000422621 426 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC007919.1-201ENST00000429380 217 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC093155.1-201ENST00000440164 826 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 GPM6BP3-201ENST00000442797 145 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RPL12P25-201ENST00000455592 494 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 SNORD121B-201ENST00000458838 81 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RPL38P4-201ENST00000502376 214 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 CYCSP26-201ENST00000534107 320 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 MIR5089-201ENST00000580047 84 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC008121.1-201ENST00000603244 268 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC025588.2-201ENST00000604851 466 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AL450336.1-201ENST00000605180 586 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC007349.4-201ENST00000608114 532 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.15-201ENST00000611544 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.16-201ENST00000613119 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.12-201ENST00000613778 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.20-201ENST00000613956 192 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.9-201ENST00000615427 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.11-201ENST00000616345 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.2-201ENST00000616535 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.3-201ENST00000617785 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.19-201ENST00000618602 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 RNU2-1-201ENST00000618664 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.6-201ENST00000619225 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.5-201ENST00000619465 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 U2.10-201ENST00000620268 191 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC098657.3-201ENST00000620434 263 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 AC120349.2-201ENST00000625002 298 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 CENPCP1-201ENST00000533085 2578 ntBASIC1.77□□□□□ -2.13
HDGFL3Q9Y3E1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AL356473.1-201ENST00000406203 1408 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 RNU5B-1-201ENST00000363286 116 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 RPL23AP29-201ENST00000397284 453 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 TPMTP3-201ENST00000411928 735 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 CYCSP48-201ENST00000417124 323 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 BPY2DP-201ENST00000422208 265 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 DPRXP1-201ENST00000426312 460 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 FO393414.1-201ENST00000428697 1184 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 SEPT7P5-201ENST00000434048 306 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 ATG12P2-201ENST00000456830 416 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AL121769.1-201ENST00000469473 401 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC092436.1-201ENST00000506450 503 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 SNORA31.6-201ENST00000516241 130 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 RNU6-362P-201ENST00000516736 90 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 OR11H5P-201ENST00000554039 926 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AL138976.2-201ENST00000563989 694 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AL162373.1-201ENST00000620433 407 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC244517.12-201ENST00000623581 663 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC093875.1-201ENST00000623688 504 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 MIR7157-201ENST00000635801 60 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 AL359851.1-201ENST00000569460 4997 ntBASIC1.76□□□□□ -2.13
HDGFL3Q9Y3E1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 MTND5P29-201ENST00000458676 1807 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 AL589826.1-201ENST00000340697 249 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 RNU6-28P-201ENST00000362378 107 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 RNU6-707P-201ENST00000364647 95 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 MIR17-201ENST00000385012 84 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 SNORD65.1-201ENST00000390889 71 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 SNORA46.1-201ENST00000391069 153 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 MCTS2P-201ENST00000394552 546 ntBASIC1.75□□□□□ -2.13
HDGFL3Q9Y3E1 AL079342.1-201ENST00000401460 267 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms