Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 TPMTP3-201ENST00000411928 735 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL049734.2-201ENST00000441066 616 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 IPO7P1-201ENST00000442031 636 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 CBWD4P-201ENST00000445695 655 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 MTCYBP43-201ENST00000513621 740 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 RNA5SP216-201ENST00000516111 123 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AP003497.1-201ENST00000528472 562 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC087241.2-201ENST00000535801 324 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC009127.3-201ENST00000570531 403 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC011471.1-201ENST00000585766 187 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL596327.1-201ENST00000603629 213 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL161729.4-201ENST00000604650 476 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL139344.1-201ENST00000605228 195 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL592221.1-201ENST00000605266 382 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 HMGB1P24-202ENST00000615653 685 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AL603758.1-201ENST00000618654 241 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AP002791.1-201ENST00000623291 381 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC006386.2-201ENST00000624491 75 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC012005.1-201ENST00000624575 75 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC008993.2-201ENST00000631744 806 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 AC080100.1-201ENST00000624239 5356 ntBASIC2.79□□□□□ -1.96
SMC3Q9UQE7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMC3Q9UQE7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 RNU6-7-201ENST00000364784 107 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 RNU6-8-201ENST00000365467 107 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 RNU6-744P-201ENST00000365557 107 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 RNU6-741P-201ENST00000383889 107 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 RNU6-637P-201ENST00000384050 107 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 RNU6-1316P-201ENST00000384242 108 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 COTL1P1-201ENST00000422309 375 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AL591719.1-201ENST00000444669 744 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 MTND2P24-201ENST00000453434 806 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AP1S2P1-201ENST00000457344 379 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC107626.1-201ENST00000471084 183 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC093281.2-201ENST00000510153 597 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC026436.1-201ENST00000510537 270 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 EEF1A1P37-201ENST00000522748 715 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AL391261.3-201ENST00000557194 520 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC090888.2-201ENST00000559765 1144 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AL158211.1-201ENST00000566763 763 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 VN1R82P-201ENST00000601481 356 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC234772.3-201ENST00000602277 528 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC112220.3-201ENST00000605502 502 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC013476.2-201ENST00000614456 459 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC009268.2-201ENST00000621925 457 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 MIR1291-201ENST00000627649 87 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.78□□□□□ -1.96
SMC3Q9UQE7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.78□□□□□ -1.96
SMC3Q9UQE7 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 PIGPP2-201ENST00000411569 458 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 Z92545.1-201ENST00000411782 234 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC083875.1-201ENST00000419509 405 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 SEPT2P1-201ENST00000419651 180 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC008850.1-201ENST00000427546 362 ntBASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC3Q9UQE7 DDX3P2-201ENST00000446138 111 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms