Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 RPL26P9-201ENST00000457466 433 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AL160314.1-201ENST00000490836 438 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC134050.1-201ENST00000495088 933 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 MIR4509-3-201ENST00000578671 94 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 MIR4509-2-201ENST00000583920 94 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC239868.4-201ENST00000608318 671 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC034102.8-201ENST00000615146 484 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 MIR4509-1-201ENST00000618224 94 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AL445984.1-201ENST00000637834 659 ntBASIC2.51□□□□□ -2.01
CDH9Q9ULB4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH9Q9ULB4 AP000776.1-201ENST00000530032 1663 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 RNU6-462P-201ENST00000362659 105 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 RNU6-884P-201ENST00000363889 107 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 DPPA3P1-201ENST00000448050 469 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC107626.1-201ENST00000471084 183 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC110760.3-202ENST00000515177 371 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 COX6CP5-201ENST00000527162 228 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC091544.4-201ENST00000555268 342 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC022662.1-201ENST00000580252 331 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC112220.3-201ENST00000605502 502 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AL157392.4-201ENST00000609756 345 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC009159.1-201ENST00000618386 642 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 AC099654.9-201ENST00000637055 678 ntBASIC2.5□□□□□ -2.01
CDH9Q9ULB4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RN7SKP226-201ENST00000364912 300 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RSL24D1P4-201ENST00000400938 484 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RN7SKP266-201ENST00000410232 287 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 USP9YP13-201ENST00000417797 480 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 HMGB1P49-201ENST00000418882 569 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RPS15AP5-201ENST00000436276 388 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 MTCO2P20-201ENST00000437339 673 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC008481.1-201ENST00000463278 396 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RPL7P18-201ENST00000478965 734 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RPS29P20-201ENST00000489592 171 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC093809.1-201ENST00000509155 340 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 RNA5SP281-201ENST00000516504 135 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 MTND2P7-201ENST00000521337 640 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 MIR5007-201ENST00000583098 95 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC080013.3-201ENST00000606839 578 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AP000676.3-201ENST00000623299 569 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC064859.1-201ENST00000624741 174 ntBASIC2.49□□□□□ -2.01
CDH9Q9ULB4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDH9Q9ULB4 AC006020.1-201ENST00000420179 1854 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 ANAPC10P1-201ENST00000395991 556 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AC023141.4-201ENST00000412031 328 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 TXNL1P1-201ENST00000429528 554 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH9Q9ULB4 RSU1P2-202ENST00000437884 485 ntBASIC2.48□□□□□ -2.01
CDH9Q9ULB4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms