Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SNORA51-201ENST00000606420 132 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC126118.1-201ENST00000607744 628 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 U6atac.1-201ENST00000616025 117 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AC084757.4-201ENST00000616350 526 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 Z99571.1-201ENST00000636677 394 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL773545.4-201ENST00000637262 310 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 AL513478.4-201ENST00000641636 310 ntBASIC3.57□□□□□ -1.84
LRFN1Q9P244 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
LRFN1Q9P244 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRFN1Q9P244 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 OR4G2P-201ENST00000328113 903 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 SNORA73.2-201ENST00000364946 201 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 Y_RNA.409-201ENST00000383990 98 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RNU6-1029P-201ENST00000384109 107 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 MIR301A-201ENST00000385261 86 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 MIR888-201ENST00000401186 77 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RAB9AP3-201ENST00000412737 573 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC099548.1-201ENST00000421443 426 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 RPL36AP53-201ENST00000432891 316 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AL596276.1-201ENST00000434465 418 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC083863.1-201ENST00000438811 231 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 MTCO2P3-201ENST00000442543 421 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RAB9AP1-201ENST00000449393 573 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 FDX1P2-201ENST00000450769 375 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 PRSS3P4-201ENST00000453323 162 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RPS29P15-201ENST00000458329 171 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RNU7-63P-201ENST00000459054 62 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC126182.1-201ENST00000478134 357 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC104806.1-201ENST00000508720 308 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 SNORA40.12-201ENST00000516329 111 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 Y_RNA.693-201ENST00000516641 110 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 RNA5SP165-201ENST00000517142 115 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AL163153.1-201ENST00000554223 283 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 GNRHR2P1-201ENST00000555315 631 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 HMGB1P33-201ENST00000563485 527 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AP001596.2-201ENST00000608410 312 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AL512643.1-201ENST00000635735 524 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 ZNF962P-201ENST00000443465 3140 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.56□□□□□ -1.84
LRFN1Q9P244 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
LRFN1Q9P244 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LRFN1Q9P244 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
LRFN1Q9P244 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LRFN1Q9P244 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 MIR423-201ENST00000362201 94 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 RNA5SP252-201ENST00000391131 119 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 MIR548F1-201ENST00000408667 84 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 MRPL50P2-201ENST00000416821 482 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 EIF1P1-201ENST00000421436 341 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AL160275.3-201ENST00000423876 471 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 HIGD1AP11-201ENST00000438361 280 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 HMGB3P22-202ENST00000451823 572 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 RPL12P25-201ENST00000455592 494 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AL162395.1-201ENST00000457882 422 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC006512.1-201ENST00000468816 291 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC083798.1-201ENST00000472671 131 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 RPS15AP34-201ENST00000487776 387 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 RPL7P47-201ENST00000497299 556 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 RNU6-1315P-201ENST00000517187 99 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 RNU6-711P-201ENST00000517255 106 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 MIR4703-201ENST00000577728 79 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 MIR4801-201ENST00000582704 82 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC008752.3-201ENST00000588113 712 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN1Q9P244 RBM11P1-201ENST00000604951 799 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AL158032.1-201ENST00000605401 106 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 DUSP12P1-201ENST00000612874 516 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC091953.5-201ENST00000622919 233 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC099506.2-201ENST00000623074 221 ntBASIC3.55□□□□□ -1.84
LRFN1Q9P244 AC073308.1-201ENST00000623696 305 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms