Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC103710.2-201ENST00000609912 942 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC245517.5-201ENST00000611529 162 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AL020991.1-201ENST00000612314 373 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 AC007656.2-201ENST00000624902 4547 ntBASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NCKIPSDQ9NZQ3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 Y_RNA.70-201ENST00000362886 110 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-456P-201ENST00000384493 107 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU2-62P-201ENST00000410868 191 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 ELOCP4-201ENST00000420090 333 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 RPS15AP6-201ENST00000420703 385 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 HMGB1P12-201ENST00000438594 598 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC026427.2-201ENST00000506228 536 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC098799.2-201ENST00000509466 868 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC046134.1-201ENST00000514454 666 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU2-27P-201ENST00000516185 142 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 SNORA74D-201ENST00000516404 141 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-358P-201ENST00000516564 75 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 SNORA20.3-201ENST00000516880 132 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 TGIF1P1-201ENST00000558095 802 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 FGF7P1-201ENST00000582820 288 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC007621.1-201ENST00000604544 437 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC009161.2-201ENST00000624626 138 ntBASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NCKIPSDQ9NZQ3 AL672296.1-201ENST00000427780 2158 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC093010.3-201ENST00000570269 15214 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 CASC19-280ENST00000642102 1351 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 OR1S2-201ENST00000302592 978 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RNY3P13-201ENST00000365542 102 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-39P-201ENST00000384344 107 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 U3.19-201ENST00000390893 196 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL21P24-201ENST00000413752 448 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL7P54-201ENST00000438336 674 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC008481.1-201ENST00000463278 396 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC114797.1-201ENST00000514003 728 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RN7SKP13-201ENST00000515933 244 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 SNORA31.22-201ENST00000517204 135 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AL355365.1-201ENST00000616480 294 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AC091953.5-201ENST00000622919 233 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 AL136313.1-201ENST00000624804 202 ntBASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms