Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RNA5SP51-201ENST00000364750 119 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 RNY4P16-201ENST00000364768 94 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 RNU5E-6P-201ENST00000365574 115 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 MTCYBP36-201ENST00000404146 440 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 RN7SKP111-201ENST00000410349 271 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC096649.2-201ENST00000416186 393 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 MTND2P18-201ENST00000419962 1030 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC119618.1-201ENST00000434191 222 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 CYCSP32-201ENST00000440548 321 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC098831.1-201ENST00000440661 216 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 COX6CP12-201ENST00000446748 202 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 MRPS17P3-201ENST00000465453 385 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC128713.1-201ENST00000471495 306 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC090525.1-201ENST00000479116 478 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 RPL36AP51-201ENST00000487216 318 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 HMGB1P41-201ENST00000520234 440 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 MIR3682-201ENST00000581338 84 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AL358072.1-201ENST00000604156 575 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AL365204.3-201ENST00000612448 685 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC006338.1-201ENST00000618453 749 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 AC120349.3-201ENST00000624377 529 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 U2.21-201ENST00000637295 81 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 CR848007.1-201ENST00000442354 1699 ntBASIC2.95□□□□□ -1.94
CHCHD3Q9NX63 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 MAPK10-266ENST00000641066 6555 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AL590004.2-201ENST00000404787 371 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RPS4XP7-201ENST00000406274 780 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RN7SKP27-201ENST00000410684 333 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 CYCSP19-201ENST00000411715 316 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 HSFY4P-201ENST00000415994 1181 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AL356583.2-201ENST00000426536 280 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AC018644.1-201ENST00000429934 551 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RPS29P7-201ENST00000439662 171 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 EPS15P1-201ENST00000448836 336 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 MTATP6P7-201ENST00000453315 681 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RPL12P25-201ENST00000455592 494 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RPL39P36-201ENST00000490784 156 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RNU6-677P-201ENST00000516914 101 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 RNU6-143P-201ENST00000516942 93 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 MIR3915-201ENST00000578518 97 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AF131215.7-201ENST00000602443 707 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AC012065.4-201ENST00000602445 679 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AC012468.1-201ENST00000604888 430 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 AL391813.2-201ENST00000609113 322 ntBASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.94□□□□□ -1.94
CHCHD3Q9NX63 ASNSP3-201ENST00000451989 1306 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AC110491.1-201ENST00000562191 2010 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AC073343.1-201ENST00000328239 651 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 RNA5SP197-201ENST00000363357 119 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 SNORA67.1-201ENST00000364749 141 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AL359837.1-201ENST00000381357 287 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 RNU6-701P-201ENST00000384059 107 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 MIR449B-201ENST00000384995 97 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 RPS15AP12-201ENST00000419498 388 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AL035423.1-201ENST00000420331 213 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AC010153.1-201ENST00000432862 727 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 AL445567.1-201ENST00000439121 144 ntBASIC2.93□□□□□ -1.94
CHCHD3Q9NX63 USP9YP15-201ENST00000442391 422 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms