Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AL139413.1-201ENST00000421309 217 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AL669831.1-202ENST00000428504 417 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AL121601.2-201ENST00000438019 707 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 GTF2IP13-201ENST00000438487 386 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC105137.1-201ENST00000484355 562 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 RPL32P34-201ENST00000486380 400 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AF213884.1-201ENST00000488102 463 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 MTCYBP18-201ENST00000501056 747 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC099522.1-202ENST00000514718 367 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 LRRC34P2-201ENST00000514850 553 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 RNU7-143P-201ENST00000516781 65 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AP003730.1-201ENST00000524605 285 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AF235103.2-201ENST00000525753 346 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC011602.1-201ENST00000546484 331 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AL118558.2-201ENST00000556294 238 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC022655.2-201ENST00000577280 318 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 MIR3138-201ENST00000585238 82 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC060780.3-201ENST00000589464 80 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AC020914.4-201ENST00000597690 277 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AL161729.3-201ENST00000603533 673 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 RNU6-89P-201ENST00000606519 100 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 DUSP12P1-201ENST00000612874 516 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 MIR8059-201ENST00000620427 81 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 AP003400.5-201ENST00000624827 617 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 MTND4P35-201ENST00000604257 1375 ntBASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LIN7CQ9NUP9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 RPL32P3-201ENST00000359025 275 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 SNORA60-201ENST00000362396 134 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 RNA5SP322-201ENST00000363617 119 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 SNORD6-201ENST00000365444 73 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 RNU6-395P-201ENST00000365662 106 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 SNORA16.2-201ENST00000390991 127 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AL592114.1-201ENST00000403842 483 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 MIR1183-201ENST00000408856 89 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 RNA5SP118-201ENST00000410385 109 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 RNU6-373P-201ENST00000411247 98 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 HSPE1P12-201ENST00000412576 301 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 SRIP2-201ENST00000428470 166 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 COX6B1P7-201ENST00000430845 235 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AL360271.2-201ENST00000447710 161 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 NUTF2P3-201ENST00000448540 384 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 RNA5SP246-201ENST00000458909 119 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC004801.2-202ENST00000463559 283 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC026979.1-201ENST00000492525 396 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC022493.1-201ENST00000492984 337 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC091885.1-201ENST00000506658 268 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC104136.1-201ENST00000512969 394 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC009902.1-201ENST00000519351 183 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC078814.3-201ENST00000553036 491 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 MIR5692A1-201ENST00000580523 69 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 MIR3939-201ENST00000582614 106 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC012119.1-201ENST00000603184 222 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 ARF4P1-201ENST00000605447 541 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AL445567.2-201ENST00000618935 498 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 MIR6830-201ENST00000636015 70 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 AC099654.14-201ENST00000638599 341 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 OR52H1-202ENST00000641796 1061 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.35□□□□□ -1.87
LIN7CQ9NUP9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 Y_RNA.378-201ENST00000365652 113 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 SNORA75B-201ENST00000384053 137 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 RNU6-45P-201ENST00000384471 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms