Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL645939.1-201ENST00000453429 797 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC007967.1-201ENST00000455422 1159 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AL583843.1-201ENST00000456070 346 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AP002812.1-201ENST00000495378 474 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC116337.1-201ENST00000509680 687 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RNU6-120P-201ENST00000516077 103 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.670-201ENST00000516255 105 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RNU6-1332P-201ENST00000516666 104 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RNA5SP73-201ENST00000516744 108 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.708-201ENST00000516950 96 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RNU6-699P-201ENST00000517081 110 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 DEFB108D-201ENST00000527787 222 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RPL23AP97-201ENST00000568955 471 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 MYL12BP1-201ENST00000569826 507 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 MIR5692C1-201ENST00000585309 91 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC008521.1-201ENST00000587471 187 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RPL7P50-201ENST00000600588 727 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 U2.17-201ENST00000611454 95 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AC004925.1-201ENST00000624256 2706 ntBASIC4.46□□□□□ -1.69
RNF38Q9H0F5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.46□□□□□ -1.69
RNF38Q9H0F5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
RNF38Q9H0F5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNF38Q9H0F5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 EXOC5P1-201ENST00000510543 1969 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 SNORD3E-201ENST00000362899 217 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.126-201ENST00000363382 111 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.153-201ENST00000363615 91 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 RNU6-960P-201ENST00000364056 120 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 RNU6-1074P-201ENST00000383995 104 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 RNU6-637P-201ENST00000384050 107 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.496-201ENST00000384444 101 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.594-201ENST00000410373 140 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 RPL21P109-201ENST00000422213 475 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AL669831.1-202ENST00000428504 417 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC236972.1-201ENST00000433225 199 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AL132765.1-201ENST00000434165 553 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 RPL23AP81-201ENST00000455252 467 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC026402.1-201ENST00000513642 170 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 SNORA31.20-201ENST00000517111 133 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 HMGN1P28-201ENST00000521340 364 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AL158032.1-201ENST00000605401 106 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 FAM27D1-201ENST00000612308 341 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.46□□□□□ -1.7
RNF38Q9H0F5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RNF38Q9H0F5 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 XIAPP3-201ENST00000312918 795 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RNU6-946P-201ENST00000383878 107 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RNU6-306P-201ENST00000384617 107 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SNORA16.2-201ENST00000390991 127 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SNORA75.6-201ENST00000391318 127 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AL109755.1-201ENST00000401791 649 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SNORA11-201ENST00000408789 128 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RNU6-1050P-201ENST00000410388 107 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RNU6-387P-201ENST00000411331 105 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RPL21P24-201ENST00000413752 448 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 ATG3P1-201ENST00000419507 911 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 COX6B1P7-201ENST00000430845 235 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RPL21P112-201ENST00000434403 463 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RPL35AP22-201ENST00000436855 335 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC078817.1-201ENST00000492623 435 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms