Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CYCSP33-201ENST00000414485 327 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.59□□□□□ -2.15
SCAPERQ9BY12 XKRYP1-201ENST00000423438 492 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SCAPERQ9BY12 AL445305.1-201ENST00000432577 575 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 XKRYP2-201ENST00000432915 492 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 RNU6-928P-201ENST00000516876 104 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 RPL21P5-201ENST00000554662 472 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.59□□□□□ -2.15
SCAPERQ9BY12 CYP3A137P-201ENST00000562436 69 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 AC009812.4-201ENST00000569134 1805 ntBASIC1.59□□□□□ -2.16
SCAPERQ9BY12 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SCAPERQ9BY12 RNU6-1293P-201ENST00000384077 107 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 RNA5SP450-201ENST00000411206 102 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 MTCO3P4-201ENST00000419236 787 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 CABYRP1-201ENST00000465493 1045 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 AC133963.2-201ENST00000513686 578 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 BTF3P12-201ENST00000519620 469 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.58□□□□□ -2.16
SCAPERQ9BY12 SUB1P4-201ENST00000566062 339 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 AL009028.1-201ENST00000604895 802 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 AC123912.5-201ENST00000605470 343 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SCAPERQ9BY12 AC091304.6-201ENST00000619761 202 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 RNU6-156P-201ENST00000621869 107 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.58□□□□□ -2.16
SCAPERQ9BY12 AC097655.1-201ENST00000635075 318 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 AC091812.1-201ENST00000432235 1948 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.58□□□□□ -2.16
SCAPERQ9BY12 MFSD8-213ENST00000641134 1327 ntBASIC1.58□□□□□ -2.16
SCAPERQ9BY12 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 RNU6-244P-201ENST00000391028 104 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 TXNP7-201ENST00000406296 293 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 Z80107.1-201ENST00000436830 412 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 COX6CP18-201ENST00000448769 222 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 RNU6-1132P-201ENST00000459214 107 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 SNORA31.8-201ENST00000516327 108 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 HSPE1P4-201ENST00000550617 308 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 OR1M4P-201ENST00000589199 287 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 BNIP3P7-201ENST00000605641 516 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 SNORD114-21-201ENST00000606412 72 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AL355810.1-201ENST00000614629 552 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AL356320.2-201ENST00000417263 507 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AL591704.2-201ENST00000421658 181 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 OR6K5P-201ENST00000447050 945 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 RNA5SP384-201ENST00000516615 116 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 AC008269.2-201ENST00000561915 1105 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 MIR548Y-201ENST00000582739 110 ntBASIC1.57□□□□□ -2.16
SCAPERQ9BY12 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.57□□□□□ -2.16
SCAPERQ9BY12 DDX43P2-201ENST00000604753 1354 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
SCAPERQ9BY12 RNU4-38P-201ENST00000364472 129 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 RNU6-193P-201ENST00000410977 107 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.56□□□□□ -2.16
SCAPERQ9BY12 OR51A5P-201ENST00000415429 942 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 AL022400.1-201ENST00000423946 935 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 SNRPGP6-201ENST00000451124 220 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.56□□□□□ -2.16
SCAPERQ9BY12 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.56□□□□□ -2.16
SCAPERQ9BY12 MIR3117-201ENST00000584034 78 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 HSPE1P7-201ENST00000604681 321 ntBASIC1.56□□□□□ -2.16
SCAPERQ9BY12 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SCAPERQ9BY12 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SCAPERQ9BY12 AC008669.1-201ENST00000565823 2178 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 MIR532-201ENST00000385025 91 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 ARF4P4-201ENST00000439608 520 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 RNF2P1-201ENST00000442955 1010 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 TPRKBP1-201ENST00000456243 481 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 AC005410.1-202ENST00000460347 485 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 RPL31P58-201ENST00000469001 379 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 AC016065.2-201ENST00000514530 444 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 MIR4287-201ENST00000579398 78 ntBASIC1.55□□□□□ -2.16
SCAPERQ9BY12 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SCAPERQ9BY12 Y_RNA.62-201ENST00000362840 99 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 RNY1P4-201ENST00000384595 115 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AL513475.1-201ENST00000406602 315 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 MIR1285-1-201ENST00000408593 84 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 RNU2-32P-201ENST00000411193 191 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 MTCO3P12-201ENST00000416718 547 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AL591212.2-201ENST00000433923 257 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AL645638.1-201ENST00000440519 361 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 NAP1L1P3-201ENST00000462291 880 ntBASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms