Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 MIR4648-201ENST00000580107 72 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 MIR4513-201ENST00000581077 86 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 RPP40P2-201ENST00000603596 712 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 DUXAP11-201ENST00000603858 526 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AC136601.2-201ENST00000604356 474 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AC007038.2-201ENST00000608095 740 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AC087241.4-201ENST00000612441 480 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AL773524.1-201ENST00000614065 229 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 MIR1264-201ENST00000616374 69 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AC006213.5-201ENST00000619673 288 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AL162233.1-201ENST00000620014 944 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 PISRT1-201ENST00000626175 531 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 MTND1P37-201ENST00000636562 264 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 MTND5P29-201ENST00000458676 1807 ntBASIC1.1□□□□□ -2.23
LIMD2Q9BT23 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
LIMD2Q9BT23 AC002543.1-201ENST00000299783 1954 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RNU6-582P-201ENST00000362989 107 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 SNORA16.1-201ENST00000364597 132 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RNU6-140P-201ENST00000384566 108 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 SNORA64-201ENST00000384674 134 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 MIR583-201ENST00000384846 75 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RNU2-33P-201ENST00000410344 192 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL139156.1-201ENST00000412785 841 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 EDDM3CP-201ENST00000415977 425 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL158823.1-201ENST00000418441 478 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RPL30P4-201ENST00000429309 333 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 ZYG11AP1-201ENST00000430329 837 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 MED14P1-201ENST00000430517 648 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 Z98742.2-201ENST00000431564 187 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL591719.1-201ENST00000444669 744 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 MTND5P8-201ENST00000449817 1083 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 TRBV1-201ENST00000476502 284 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RPL21P99-201ENST00000480369 423 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 HMGB1P36-201ENST00000487709 576 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AC119751.5-201ENST00000514077 770 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RNA5SP182-201ENST00000516064 82 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AP003066.2-201ENST00000529375 555 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 RANP3-201ENST00000530970 276 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AC008127.2-201ENST00000549925 1075 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL354943.1-201ENST00000572103 781 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AC068790.3-201ENST00000602988 553 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL121652.1-201ENST00000608851 448 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AP001521.1-201ENST00000609150 300 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AC013476.2-201ENST00000614456 459 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AL445493.3-201ENST00000619568 477 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 AP002791.1-201ENST00000623291 381 ntBASIC1.09□□□□□ -2.23
LIMD2Q9BT23 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 MIR126-201ENST00000362291 85 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 RNA5SP88-201ENST00000365560 109 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 SNORA70B-201ENST00000384210 135 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 MIR218-1-201ENST00000384999 110 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 CISD1P1-201ENST00000393907 327 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 HMGN2P39-201ENST00000398005 273 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 MTCO2P31-201ENST00000402702 684 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 NDUFS5P1-201ENST00000405668 289 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 SNORA3.2-201ENST00000408221 125 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 RPS24P7-201ENST00000416921 246 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 BX276092.3-201ENST00000424182 230 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL353729.1-201ENST00000425044 720 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 RAC1P8-201ENST00000427086 527 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL590623.1-201ENST00000427864 105 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL360221.1-201ENST00000445989 335 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 RPL23AP6-201ENST00000446637 472 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 RPL26P9-201ENST00000457466 433 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 RPS20P22-201ENST00000473700 357 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AL049874.1-201ENST00000489560 388 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AC034222.1-201ENST00000494052 532 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AC118282.2-201ENST00000508739 374 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AC109471.1-201ENST00000511631 612 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 AC008549.1-201ENST00000512900 643 ntBASIC1.08□□□□□ -2.24
LIMD2Q9BT23 MRPS33P3-201ENST00000513456 322 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms