Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK1Q99986 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC073063.1-201ENST00000434352 607 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.79□□□□□ -1.8
VRK1Q99986 NUTF2P3-201ENST00000448540 384 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC103987.1-201ENST00000473394 348 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 RPS26P15-201ENST00000488067 348 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AP002812.1-201ENST00000495378 474 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VRK1Q99986 RNU6-1069P-201ENST00000516612 133 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 MIR2114-201ENST00000516645 80 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 CYCSP27-201ENST00000527643 293 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC107016.1-201ENST00000550463 337 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 TRAV28-201ENST00000557548 323 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC136624.4-201ENST00000573044 370 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 MIR548AC-201ENST00000585049 88 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AL020997.2-201ENST00000602607 184 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC012119.1-201ENST00000603184 222 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC020910.2-201ENST00000603635 610 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AC104237.2-201ENST00000612456 443 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.79□□□□□ -1.8
VRK1Q99986 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.79□□□□□ -1.8
VRK1Q99986 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VRK1Q99986 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
VRK1Q99986 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
VRK1Q99986 AC007785.2-201ENST00000598627 1916 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 CPHL1P-201ENST00000461341 3407 ntBASIC3.79□□□□□ -1.8
VRK1Q99986 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
VRK1Q99986 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK1Q99986 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK1Q99986 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK1Q99986 OR5P1P-201ENST00000299512 925 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 Y_RNA.184-201ENST00000363884 108 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 Y_RNA.813-201ENST00000364639 102 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 Y_RNA.480-201ENST00000384364 102 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRK1Q99986 AL445189.1-201ENST00000405722 338 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 RPL21P90-201ENST00000415692 466 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 CRYBB2P1-203ENST00000415709 538 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 RPL23AP69-201ENST00000431134 458 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 GPM6BP2-201ENST00000432046 144 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK1Q99986 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK1Q99986 GPM6BP1-201ENST00000446387 144 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.78□□□□□ -1.8
VRK1Q99986 AC105137.1-201ENST00000484355 562 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 FTH1P9-201ENST00000513251 355 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 RNU6-277P-201ENST00000516272 106 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 RNA5SP290-201ENST00000517133 127 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.78□□□□□ -1.8
VRK1Q99986 AP003122.3-201ENST00000526316 255 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AC084851.1-201ENST00000529105 249 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.78□□□□□ -1.8
VRK1Q99986 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VRK1Q99986 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.78□□□□□ -1.8
VRK1Q99986 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRK1Q99986 AL157871.3-201ENST00000557231 293 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.78□□□□□ -1.8
VRK1Q99986 MIR4795-201ENST00000584182 89 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 MIR3138-201ENST00000585238 82 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 BPIFA4P-203ENST00000603168 689 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AC104662.1-201ENST00000604448 511 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VRK1Q99986 AC103710.3-201ENST00000608157 948 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 DUSP12P1-201ENST00000612874 516 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AL713922.2-201ENST00000619384 716 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 AL133216.2-202ENST00000634512 349 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
VRK1Q99986 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VRK1Q99986 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.78□□□□□ -1.8
VRK1Q99986 AC066616.2-201ENST00000559334 1481 ntBASIC3.78□□□□□ -1.8
VRK1Q99986 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRK1Q99986 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VRK1Q99986 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRK1Q99986 MAPK10-253ENST00000641010 4072 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC018555.1-201ENST00000567548 1980 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 MIR331-201ENST00000362302 94 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 RNA5SP307-201ENST00000362863 116 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRK1Q99986 RNU6-1197P-201ENST00000391183 107 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 HSPE1P26-201ENST00000405341 275 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 PPIAP31-201ENST00000405422 495 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC092047.1-201ENST00000424997 240 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms