Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC079203.1-201ENST00000487972 404 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 MTCYBP17-201ENST00000503579 789 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.25□□□□□ -2.05
CDX2Q99626 MTND5P4-201ENST00000514978 288 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 RNU6-276P-201ENST00000516114 96 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 SNORA31.22-201ENST00000517204 135 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.25□□□□□ -2.05
CDX2Q99626 AP001804.3-201ENST00000525146 880 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDX2Q99626 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.25□□□□□ -2.05
CDX2Q99626 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.25□□□□□ -2.05
CDX2Q99626 AL354943.1-201ENST00000572103 781 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 OR4K8P-201ENST00000578842 1048 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 AC245884.10-201ENST00000597355 337 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 DUXAP11-201ENST00000603858 526 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 AC069431.2-201ENST00000604149 1099 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 AL031176.1-201ENST00000604554 466 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.25□□□□□ -2.05
CDX2Q99626 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.25□□□□□ -2.05
CDX2Q99626 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
CDX2Q99626 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDX2Q99626 RNA5SP393-201ENST00000363423 117 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 MIR627-201ENST00000384979 97 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 MIR620-201ENST00000385232 95 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 MTATP6P27-201ENST00000416987 621 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 RPL27AP8-201ENST00000424277 446 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.24□□□□□ -2.05
CDX2Q99626 AC234781.2-201ENST00000426370 994 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 MTCO1P53-201ENST00000441633 699 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.24□□□□□ -2.05
CDX2Q99626 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
CDX2Q99626 ARPC3P5-201ENST00000448802 534 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDX2Q99626 FCF1P6-201ENST00000456841 595 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 RNU7-136P-201ENST00000458819 69 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 AC092436.3-201ENST00000511788 257 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 RNY4P37-201ENST00000516225 96 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 CASP1P1-201ENST00000526345 212 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
CDX2Q99626 LRRC6P1-201ENST00000532188 885 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.24□□□□□ -2.05
CDX2Q99626 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 AL132657.2-201ENST00000564417 358 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.24□□□□□ -2.05
CDX2Q99626 AC008739.2-201ENST00000597006 317 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.24□□□□□ -2.05
CDX2Q99626 AC013444.2-201ENST00000603317 787 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AC024560.3-201ENST00000608482 349 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AC027449.1-201ENST00000608890 407 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AC090132.2-201ENST00000615881 347 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AL357080.1-201ENST00000617394 239 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 MIR6130-201ENST00000619419 109 ntBASIC2.24□□□□□ -2.05
CDX2Q99626 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.24□□□□□ -2.05
CDX2Q99626 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CDX2Q99626 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.24□□□□□ -2.05
CDX2Q99626 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.23□□□□□ -2.05
CDX2Q99626 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CDX2Q99626 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX2Q99626 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CDX2Q99626 FRG1BP-201ENST00000278882 761 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 DEFB108F-201ENST00000344638 222 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 RNU6-560P-201ENST00000364007 108 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 RNU2-68P-201ENST00000410878 191 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AC090774.1-201ENST00000435925 246 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX2Q99626 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX2Q99626 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC140059.1-201ENST00000489238 361 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AC104564.1-201ENST00000493028 407 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC119751.4-201ENST00000507498 357 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 SNORA31.15-201ENST00000516771 132 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AC022861.1-201ENST00000522981 663 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 DEFB108D-201ENST00000527787 222 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX2Q99626 MIR3921-201ENST00000577308 85 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AP005136.1-201ENST00000579765 429 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 LRRC37A5P-203ENST00000580181 585 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.23□□□□□ -2.05
CDX2Q99626 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.23□□□□□ -2.05
CDX2Q99626 BNIP3P27-201ENST00000599991 412 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.23□□□□□ -2.05
CDX2Q99626 AL391001.1-201ENST00000602747 715 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.23□□□□□ -2.05
CDX2Q99626 AC034229.4-201ENST00000607861 441 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 PART1_2.1-201ENST00000612397 250 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 MIR6504-201ENST00000613520 61 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AL050303.3-201ENST00000613704 284 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 AC091834.1-201ENST00000614543 472 ntBASIC2.23□□□□□ -2.05
CDX2Q99626 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms