Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 Y_RNA.675-201ENST00000516389 149 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 MIR3941-201ENST00000582572 103 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC073539.2-201ENST00000597113 165 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC103705.1-201ENST00000619013 241 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 TPTEP1-208ENST00000636884 213 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC112487.2-201ENST00000637950 304 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 MIR449B-201ENST00000384995 97 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 RPLP0P7-201ENST00000416050 667 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC018644.1-201ENST00000429934 551 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 RNU6-329P-201ENST00000459618 107 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC139453.3-201ENST00000493276 369 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC090136.1-201ENST00000520009 240 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 MIR3944-201ENST00000581277 108 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AC005261.5-201ENST00000596280 355 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 AL606490.9-201ENST00000603331 271 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 MIR7154-201ENST00000620673 73 ntBASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SYNPOQ8N3V7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 Y_RNA.166-201ENST00000363730 102 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RNA5SP22-201ENST00000365393 109 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 Y_RNA.399-201ENST00000383955 105 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 MIR450B-201ENST00000401182 78 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RN7SKP53-201ENST00000411337 315 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC007560.1-201ENST00000426912 237 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 NDUFA5P4-201ENST00000436704 385 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RPS29P7-201ENST00000439662 171 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AL360271.2-201ENST00000447710 161 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RPL12P25-201ENST00000455592 494 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RNU6-323P-201ENST00000521915 107 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AP003122.3-201ENST00000526316 255 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC084851.1-201ENST00000529105 249 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC090115.3-201ENST00000553218 849 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RPL23AP97-201ENST00000568955 471 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 RPS3AP23-202ENST00000574601 686 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 MIR5685-201ENST00000579080 79 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC024220.1-201ENST00000603675 484 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC104662.1-201ENST00000604448 511 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC010201.1-201ENST00000605051 540 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AL353621.2-201ENST00000605340 133 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC002044.1-201ENST00000606707 158 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 AC027309.3-201ENST00000623419 351 ntBASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.28□□□□□ -1.72
SYNPOQ8N3V7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AF127577.6-201ENST00000623352 2191 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC121333.1-201ENST00000567488 2709 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms