Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC65Q8IXS2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC65Q8IXS2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC65Q8IXS2 RNU6-83P-201ENST00000384568 112 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 MIR634-201ENST00000385208 97 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AL109755.1-201ENST00000401791 649 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 MTND1P21-201ENST00000412991 285 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AL512844.2-201ENST00000433990 593 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 CBWD4P-201ENST00000445695 655 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 BMI1P1-201ENST00000445879 941 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 WASF1P1-201ENST00000447560 1131 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC090096.1-201ENST00000489168 390 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 TRAV28-201ENST00000557548 323 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC245884.10-201ENST00000597355 337 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AF131215.7-201ENST00000602443 707 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AL592221.1-201ENST00000605266 382 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC009902.3-201ENST00000606235 2172 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC65Q8IXS2 AL161629.2-201ENST00000615347 275 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AP000484.1-201ENST00000620067 1252 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC009268.2-201ENST00000621925 457 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 MIR6766-201ENST00000622641 72 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AL078595.3-201ENST00000623815 1166 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AL138713.1-201ENST00000624026 2130 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 AC019226.1-201ENST00000625666 515 ntBASIC2.55□□□□□ -2
CCDC65Q8IXS2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC106754.1-201ENST00000562632 1513 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 AL596028.1-201ENST00000326971 197 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 RNU6-462P-201ENST00000362659 105 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 RNU6-433P-201ENST00000363216 104 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AL590084.2-201ENST00000401481 382 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 RNU6-757P-201ENST00000410334 100 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC107081.1-201ENST00000414975 361 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC099548.1-201ENST00000421443 426 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 MTND3P1-201ENST00000441336 220 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 AP002748.2-201ENST00000528671 348 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 MTCO2P15-201ENST00000532655 656 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC090888.1-201ENST00000561335 1141 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 MIR4672-201ENST00000583126 81 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 MTCO2P2-201ENST00000591258 225 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC079089.3-201ENST00000603094 673 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AL139344.1-201ENST00000605228 195 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC65Q8IXS2 AL159972.1-201ENST00000625150 448 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 AC099063.3-201ENST00000642066 185 ntBASIC2.54□□□□□ -2
CCDC65Q8IXS2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.54□□□□□ -2
CCDC65Q8IXS2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC65Q8IXS2 MTND5P33-201ENST00000571250 1450 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC65Q8IXS2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC65Q8IXS2 SNORA67.4-201ENST00000384688 142 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 RN7SKP266-201ENST00000410232 287 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 RNU6-516P-201ENST00000411381 104 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC009414.1-201ENST00000427200 443 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC009296.1-201ENST00000443146 155 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 RPS20P20-201ENST00000460498 340 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 RPS27P26-201ENST00000494583 239 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 HSPE1P23-201ENST00000509838 286 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 SCARNA1-201ENST00000517138 166 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC078814.3-201ENST00000553036 491 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AL049838.1-201ENST00000563647 981 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC007938.3-201ENST00000604965 623 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AL158042.1-201ENST00000605338 460 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC097478.2-201ENST00000610572 514 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AC092106.3-201ENST00000611308 722 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 AL139418.1-201ENST00000613613 177 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 TUG1_2.1-201ENST00000614234 87 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 MIR4275-201ENST00000636486 87 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 MTND1P37-201ENST00000636562 264 ntBASIC2.53□□□□□ -2
CCDC65Q8IXS2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms