Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 U3.12-201ENST00000364498 214 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 Y_RNA.373-201ENST00000365600 103 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 SNORA32.2-201ENST00000384049 122 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 RNU6-1127P-201ENST00000384580 107 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 CISD1P1-201ENST00000393907 327 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 PDCL2P1-201ENST00000419302 352 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AP001086.1-201ENST00000494882 321 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 MTCO3P9-201ENST00000506989 781 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 FAM206BP-201ENST00000510179 541 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 SNORA70.16-201ENST00000516390 95 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 RN7SKP256-201ENST00000517201 314 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 BTF3P12-201ENST00000519620 469 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 MIR5583-1-201ENST00000580941 59 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AC053481.4-201ENST00000583164 216 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AC002545.1-201ENST00000592511 181 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AC092807.2-201ENST00000609367 243 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 C2orf27A-204ENST00000623058 969 ntBASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KHDC1Q4VXA5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.78
KHDC1Q4VXA5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
KHDC1Q4VXA5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
KHDC1Q4VXA5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.9□□□□□ -1.78
KHDC1Q4VXA5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 Y_RNA.126-201ENST00000363382 111 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 Y_RNA.378-201ENST00000365652 113 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 SNORA57.1-201ENST00000391227 145 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AL356967.1-201ENST00000406305 431 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RNU6-628P-201ENST00000410675 107 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 BX323014.1-201ENST00000412876 237 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 MTND3P8-201ENST00000412909 339 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 BX842559.1-201ENST00000419615 532 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RPL21P109-201ENST00000422213 475 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RPS29P7-201ENST00000439662 171 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RPS15AP27-201ENST00000449183 343 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 TTC39CP1-201ENST00000512513 755 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 APOOP4-201ENST00000513530 597 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RNU6-1038P-201ENST00000516516 104 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 RPL7P20-201ENST00000520308 745 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AL592436.1-201ENST00000605135 558 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AP004289.2-201ENST00000444413 1457 ntBASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KHDC1Q4VXA5 AC027290.2-201ENST00000623210 18662 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC121333.1-201ENST00000567488 2709 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AL133412.1-201ENST00000380194 2992 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 Y_RNA.530-201ENST00000384587 101 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 RNA5SP239-201ENST00000410218 129 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 RNU2-71P-201ENST00000411395 189 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AL160275.3-201ENST00000423876 471 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC091390.3-201ENST00000426478 338 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC092017.2-201ENST00000427600 362 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 FTH1P6-201ENST00000430768 320 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AL365400.1-201ENST00000431854 640 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 RANP8-201ENST00000444720 713 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 RNU6-329P-201ENST00000459618 107 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC004801.2-202ENST00000463559 283 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 RPS20P22-201ENST00000473700 357 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 FGF7P4-201ENST00000509595 295 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC112206.3-201ENST00000514578 389 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 RNU7-30P-201ENST00000516835 62 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.89□□□□□ -1.79
KHDC1Q4VXA5 ATP5F1P5-201ENST00000526403 760 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms