Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 BX842559.1-201ENST00000419615 532 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.54□□□□□ -1.68
SSRP1Q08945 NDUFB4P7-201ENST00000423198 363 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AL669831.1-202ENST00000428504 417 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.54□□□□□ -1.68
SSRP1Q08945 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.54□□□□□ -1.68
SSRP1Q08945 NDUFA5P4-201ENST00000436704 385 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 GTF2IP13-201ENST00000438487 386 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 HMGB3P11-201ENST00000440127 604 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 HSFY6P-201ENST00000445573 403 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AC008264.1-201ENST00000447612 367 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 HMGB3P22-202ENST00000451823 572 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 RPL21P11-201ENST00000461458 483 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 DYNLL1P5-201ENST00000467158 270 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.54□□□□□ -1.68
SSRP1Q08945 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.54□□□□□ -1.68
SSRP1Q08945 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.54□□□□□ -1.68
SSRP1Q08945 APOOP4-201ENST00000513530 597 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 RNU6-277P-201ENST00000516272 106 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AC090136.1-201ENST00000520009 240 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.54□□□□□ -1.68
SSRP1Q08945 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.54□□□□□ -1.68
SSRP1Q08945 AC120057.2-201ENST00000571520 271 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.54□□□□□ -1.68
SSRP1Q08945 AL020997.2-201ENST00000602607 184 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AC107294.1-201ENST00000609524 467 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 AC104237.2-201ENST00000612456 443 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 MIR6500-201ENST00000622700 86 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 RNA5SP196-201ENST00000625967 102 ntBASIC4.54□□□□□ -1.68
SSRP1Q08945 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.54□□□□□ -1.68
SSRP1Q08945 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SSRP1Q08945 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.54□□□□□ -1.68
SSRP1Q08945 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.54□□□□□ -1.68
SSRP1Q08945 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSRP1Q08945 USP8P1-201ENST00000494673 3183 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 UBE2L2-201ENST00000254302 429 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 RNU6-600P-201ENST00000362524 99 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 RN7SKP227-201ENST00000364445 330 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSRP1Q08945 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSRP1Q08945 RNA5SP39-201ENST00000411245 120 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 RPS20P15-201ENST00000412792 311 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 RPL7P10-201ENST00000417407 739 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC091390.3-201ENST00000426478 338 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.53□□□□□ -1.68
SSRP1Q08945 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.53□□□□□ -1.68
SSRP1Q08945 AL451050.1-201ENST00000450126 415 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.53□□□□□ -1.68
SSRP1Q08945 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.53□□□□□ -1.68
SSRP1Q08945 RNU7-167P-201ENST00000459160 62 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.53□□□□□ -1.68
SSRP1Q08945 RPS20P22-201ENST00000473700 357 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC012181.1-201ENST00000479895 423 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC069499.1-201ENST00000489433 509 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 TRBVA-201ENST00000498804 316 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC104136.1-201ENST00000512969 394 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 RNU2-69P-201ENST00000516061 100 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 RNU6-1256P-201ENST00000516539 103 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.53□□□□□ -1.68
SSRP1Q08945 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSRP1Q08945 AC093027.1-201ENST00000546698 429 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC090115.3-201ENST00000553218 849 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 MTCO3P23-201ENST00000561363 289 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AL355375.2-201ENST00000574825 175 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.53□□□□□ -1.68
SSRP1Q08945 ZYXP1-201ENST00000617638 118 ntBASIC4.53□□□□□ -1.68
SSRP1Q08945 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSRP1Q08945 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSRP1Q08945 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SSRP1Q08945 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSRP1Q08945 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SSRP1Q08945 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AC006026.1-201ENST00000444025 1803 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 SNORA31-201ENST00000362607 130 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 RNU4-79P-201ENST00000362764 141 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 RNA5SP283-201ENST00000365604 119 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 Y_RNA.534-201ENST00000384599 112 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 BTF3L4P3-201ENST00000418879 476 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 RPL17P36-201ENST00000420302 549 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 AC004975.1-201ENST00000428733 208 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 ATP5HP2-201ENST00000433885 485 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.52□□□□□ -1.69
SSRP1Q08945 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AP000926.1-201ENST00000479573 241 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.52□□□□□ -1.69
SSRP1Q08945 SNORA70.16-201ENST00000516390 95 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 MIR2116-201ENST00000517221 80 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.52□□□□□ -1.69
SSRP1Q08945 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AC007224.1-201ENST00000564410 144 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.52□□□□□ -1.69
SSRP1Q08945 AL353621.2-201ENST00000605340 133 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 DUSP12P1-201ENST00000612874 516 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 MIR4727-201ENST00000622232 55 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms