Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC005410.1-202ENST00000460347 485 ntBASIC1.21□□□□□ -2.22
UBA52P62987 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.21□□□□□ -2.22
UBA52P62987 AC107398.1-201ENST00000486904 505 ntBASIC1.21□□□□□ -2.22
UBA52P62987 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.21□□□□□ -2.22
UBA52P62987 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.21□□□□□ -2.22
UBA52P62987 AC098862.1-201ENST00000504991 413 ntBASIC1.21□□□□□ -2.22
UBA52P62987 AC008834.1-201ENST00000511612 175 ntBASIC1.21□□□□□ -2.22
UBA52P62987 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.21□□□□□ -2.22
UBA52P62987 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.21□□□□□ -2.22
UBA52P62987 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.21□□□□□ -2.22
UBA52P62987 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.21□□□□□ -2.22
UBA52P62987 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.21□□□□□ -2.22
UBA52P62987 MIR4504-201ENST00000577413 92 ntBASIC1.21□□□□□ -2.22
UBA52P62987 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.21□□□□□ -2.22
UBA52P62987 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UBA52P62987 RNU4-23P-201ENST00000362839 140 ntBASIC1.2□□□□□ -2.22
UBA52P62987 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
UBA52P62987 RNU6-270P-201ENST00000364131 105 ntBASIC1.2□□□□□ -2.22
UBA52P62987 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.2□□□□□ -2.22
UBA52P62987 MIR489-201ENST00000384923 84 ntBASIC1.2□□□□□ -2.22
UBA52P62987 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UBA52P62987 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.2□□□□□ -2.22
UBA52P62987 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.2□□□□□ -2.22
UBA52P62987 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.2□□□□□ -2.22
UBA52P62987 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.2□□□□□ -2.22
UBA52P62987 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.2□□□□□ -2.22
UBA52P62987 RPL12P25-201ENST00000455592 494 ntBASIC1.2□□□□□ -2.22
UBA52P62987 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.2□□□□□ -2.22
UBA52P62987 AC104108.1-201ENST00000509930 412 ntBASIC1.2□□□□□ -2.22
UBA52P62987 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.2□□□□□ -2.22
UBA52P62987 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.2□□□□□ -2.22
UBA52P62987 AC098848.2-201ENST00000588023 330 ntBASIC1.2□□□□□ -2.22
UBA52P62987 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.2□□□□□ -2.22
UBA52P62987 AP003072.5-201ENST00000623872 773 ntBASIC1.2□□□□□ -2.22
UBA52P62987 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UBA52P62987 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.2□□□□□ -2.22
UBA52P62987 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.19□□□□□ -2.22
UBA52P62987 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBA52P62987 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
UBA52P62987 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
UBA52P62987 RN7SKP158-201ENST00000410453 326 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.19□□□□□ -2.22
UBA52P62987 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
UBA52P62987 AC244636.1-201ENST00000421152 228 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AC090774.1-201ENST00000435925 246 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AP000949.1-201ENST00000438328 629 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.19□□□□□ -2.22
UBA52P62987 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.19□□□□□ -2.22
UBA52P62987 Z73417.1-201ENST00000447373 778 ntBASIC1.19□□□□□ -2.22
UBA52P62987 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.19□□□□□ -2.22
UBA52P62987 HMGN1P7-201ENST00000491722 313 ntBASIC1.19□□□□□ -2.22
UBA52P62987 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.19□□□□□ -2.22
UBA52P62987 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.19□□□□□ -2.22
UBA52P62987 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.19□□□□□ -2.22
UBA52P62987 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.19□□□□□ -2.22
UBA52P62987 AP002748.2-201ENST00000528671 348 ntBASIC1.19□□□□□ -2.22
UBA52P62987 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.19□□□□□ -2.22
UBA52P62987 AC010186.2-204ENST00000537668 439 ntBASIC1.19□□□□□ -2.22
UBA52P62987 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.19□□□□□ -2.22
UBA52P62987 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.19□□□□□ -2.22
UBA52P62987 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AL078605.1-201ENST00000603529 500 ntBASIC1.19□□□□□ -2.22
UBA52P62987 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
UBA52P62987 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.19□□□□□ -2.22
UBA52P62987 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBA52P62987 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
UBA52P62987 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.18□□□□□ -2.22
UBA52P62987 Y_RNA.40-201ENST00000362645 93 ntBASIC1.18□□□□□ -2.22
UBA52P62987 Y_RNA.191-201ENST00000363972 113 ntBASIC1.18□□□□□ -2.22
UBA52P62987 SNORA51.12-201ENST00000384448 134 ntBASIC1.18□□□□□ -2.22
UBA52P62987 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
UBA52P62987 RNU6-712P-201ENST00000410558 100 ntBASIC1.18□□□□□ -2.22
UBA52P62987 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.18□□□□□ -2.22
UBA52P62987 RPS3AP9-201ENST00000417027 792 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC244453.4-201ENST00000419150 388 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AL109913.1-201ENST00000421173 514 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC246680.2-201ENST00000422106 389 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
UBA52P62987 AC244035.1-201ENST00000430042 390 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC092573.2-201ENST00000434546 243 ntBASIC1.18□□□□□ -2.22
UBA52P62987 FABP5P3-201ENST00000437960 408 ntBASIC1.18□□□□□ -2.22
UBA52P62987 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.18□□□□□ -2.22
UBA52P62987 MOB1AP2-201ENST00000446060 614 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.18□□□□□ -2.22
UBA52P62987 HMGN2P10-201ENST00000448085 265 ntBASIC1.18□□□□□ -2.22
UBA52P62987 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC093801.2-201ENST00000503966 1050 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.18□□□□□ -2.22
UBA52P62987 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
UBA52P62987 AC006338.1-201ENST00000618453 749 ntBASIC1.18□□□□□ -2.22
UBA52P62987 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.18□□□□□ -2.22
UBA52P62987 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
UBA52P62987 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.18□□□□□ -2.22
UBA52P62987 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
UBA52P62987 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
UBA52P62987 RNA5SP125-201ENST00000364843 120 ntBASIC1.17□□□□□ -2.22
UBA52P62987 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
UBA52P62987 RNU6-1197P-201ENST00000391183 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms