Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TVP23BP1-201ENST00000557500 617 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.78□□□□□ -1.8
CLRN1P58418 RN7SL176P-201ENST00000580352 264 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.78□□□□□ -1.8
CLRN1P58418 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN1P58418 MIR548AC-201ENST00000585049 88 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC006504.6-201ENST00000590142 199 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 CYP2C61P-201ENST00000604072 290 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AC116312.1-201ENST00000606841 314 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 AL157817.1-201ENST00000614264 790 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN1P58418 MIR7702-201ENST00000621931 59 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN1P58418 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN1P58418 AC011266.1-201ENST00000624119 3569 ntBASIC3.78□□□□□ -1.8
CLRN1P58418 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.77□□□□□ -1.81
CLRN1P58418 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.77□□□□□ -1.81
CLRN1P58418 MTND5P10-201ENST00000603719 1809 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN1P58418 AC018529.3-201ENST00000624212 2254 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AL136964.1-201ENST00000622038 2990 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 MTND5P19-201ENST00000424872 1794 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 AC138393.1-203ENST00000327086 343 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RNA5SP52-201ENST00000362448 134 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 Y_RNA.31-201ENST00000362574 102 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RNU6-593P-201ENST00000364716 112 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RNU6-1181P-201ENST00000384191 106 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RNU6-310P-201ENST00000384655 107 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RPL23AP48-201ENST00000406913 488 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CLRN1P58418 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.77□□□□□ -1.81
CLRN1P58418 ELOCP19-201ENST00000411919 318 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 ATG3P1-201ENST00000419507 911 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AL157831.1-201ENST00000426134 473 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.77□□□□□ -1.81
CLRN1P58418 GPM6BP2-201ENST00000432046 144 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AL359672.1-201ENST00000442302 409 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN1P58418 GPM6BP1-201ENST00000446387 144 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RPS29P33-201ENST00000456717 146 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN1P58418 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.77□□□□□ -1.81
CLRN1P58418 AC116337.1-201ENST00000509680 687 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 RNU6-1016P-201ENST00000516689 94 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AC134698.5-201ENST00000519444 336 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.77□□□□□ -1.81
CLRN1P58418 AC026371.1-201ENST00000551867 419 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.77□□□□□ -1.81
CLRN1P58418 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 AC098826.3-201ENST00000603823 466 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 MIR6820-201ENST00000611508 62 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN1P58418 AC098657.3-201ENST00000620434 263 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 uc_338.22-201ENST00000622722 187 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AL512643.1-201ENST00000635735 524 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 AL669831.3-213ENST00000636676 183 ntBASIC3.77□□□□□ -1.81
CLRN1P58418 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLRN1P58418 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN1P58418 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN1P58418 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN1P58418 RNU1-94P-201ENST00000362627 173 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNU1-14P-201ENST00000362759 152 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNU6-1167P-201ENST00000363227 94 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 SNORA33.2-201ENST00000365413 134 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 Y_RNA.422-201ENST00000384054 114 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 Y_RNA.480-201ENST00000384364 102 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNU6-1160P-201ENST00000384546 104 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNU6-95P-201ENST00000384697 107 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNU6-308P-201ENST00000390957 107 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 Y_RNA.646-201ENST00000410980 101 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN1P58418 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 snoU13.4-201ENST00000458916 104 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RPL31P60-201ENST00000478450 367 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.76□□□□□ -1.81
CLRN1P58418 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.76□□□□□ -1.81
CLRN1P58418 AC017037.1-201ENST00000508460 471 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLRN1P58418 PARP4P3-201ENST00000510265 317 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN1P58418 RNA5SP519-201ENST00000516480 119 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNA5SP73-201ENST00000516744 108 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RNU6-143P-201ENST00000516942 93 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 AC063950.1-201ENST00000552036 308 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 SNRPGP18-201ENST00000553000 214 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.76□□□□□ -1.81
CLRN1P58418 AC016925.2-201ENST00000605108 242 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 AL356218.2-201ENST00000605264 187 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 MIR432-201ENST00000606207 94 ntBASIC3.76□□□□□ -1.81
CLRN1P58418 AC019193.3-201ENST00000609144 554 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms