Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL137003.2-201ENST00000606924 2538 ntBASIC2.49□□□□□ -2.01
LIM2P55344 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LIM2P55344 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIM2P55344 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
LIM2P55344 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.49□□□□□ -2.01
LIM2P55344 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIM2P55344 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LIM2P55344 SNORA5B-201ENST00000363786 132 ntBASIC2.49□□□□□ -2.01
LIM2P55344 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIM2P55344 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.49□□□□□ -2.01
LIM2P55344 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
LIM2P55344 RNU6-198P-201ENST00000384258 104 ntBASIC2.49□□□□□ -2.01
LIM2P55344 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LIM2P55344 RNU2-52P-201ENST00000410680 190 ntBASIC2.49□□□□□ -2.01
LIM2P55344 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
LIM2P55344 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.49□□□□□ -2.01
LIM2P55344 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.49□□□□□ -2.01
LIM2P55344 AC019097.1-201ENST00000424783 735 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AC244035.1-201ENST00000430042 390 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL365184.2-201ENST00000431139 435 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.49□□□□□ -2.01
LIM2P55344 AC129850.1-201ENST00000436203 508 ntBASIC2.49□□□□□ -2.01
LIM2P55344 UBE2D3P1-201ENST00000436669 444 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.49□□□□□ -2.01
LIM2P55344 AP000936.2-201ENST00000447151 681 ntBASIC2.49□□□□□ -2.01
LIM2P55344 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.49□□□□□ -2.01
LIM2P55344 SNRPGP6-201ENST00000451124 220 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.49□□□□□ -2.01
LIM2P55344 MTCO1P42-201ENST00000457379 726 ntBASIC2.49□□□□□ -2.01
LIM2P55344 RNU7-23P-201ENST00000459465 62 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AP001486.1-201ENST00000463339 476 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AC010631.1-201ENST00000474150 156 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL160314.1-201ENST00000490836 438 ntBASIC2.49□□□□□ -2.01
LIM2P55344 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.49□□□□□ -2.01
LIM2P55344 MTND5P13-201ENST00000513046 1079 ntBASIC2.49□□□□□ -2.01
LIM2P55344 RNU6-232P-201ENST00000517144 64 ntBASIC2.49□□□□□ -2.01
LIM2P55344 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LIM2P55344 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.49□□□□□ -2.01
LIM2P55344 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.49□□□□□ -2.01
LIM2P55344 AC007115.1-201ENST00000546853 234 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AC123904.3-201ENST00000547218 814 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.49□□□□□ -2.01
LIM2P55344 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.49□□□□□ -2.01
LIM2P55344 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.49□□□□□ -2.01
LIM2P55344 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.49□□□□□ -2.01
LIM2P55344 MIR4319-201ENST00000577285 85 ntBASIC2.49□□□□□ -2.01
LIM2P55344 MIR4293-201ENST00000584305 78 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL359999.1-201ENST00000604513 294 ntBASIC2.49□□□□□ -2.01
LIM2P55344 NUTF2P8-201ENST00000604593 363 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL035413.2-201ENST00000604801 525 ntBASIC2.49□□□□□ -2.01
LIM2P55344 uc_338.12-201ENST00000616344 181 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AC009159.1-201ENST00000618386 642 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL603755.1-201ENST00000619504 163 ntBASIC2.49□□□□□ -2.01
LIM2P55344 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIM2P55344 AL365361.1-201ENST00000566942 3481 ntBASIC2.49□□□□□ -2.01
LIM2P55344 AL359693.1-201ENST00000614959 2407 ntBASIC2.49□□□□□ -2.01
LIM2P55344 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIM2P55344 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.48□□□□□ -2.01
LIM2P55344 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LIM2P55344 RNU6-270P-201ENST00000364131 105 ntBASIC2.48□□□□□ -2.01
LIM2P55344 RNU4-72P-201ENST00000410754 173 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC006366.1-201ENST00000422002 759 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC011233.1-201ENST00000422812 283 ntBASIC2.48□□□□□ -2.01
LIM2P55344 ZNF863P-201ENST00000426746 417 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC063976.3-201ENST00000426849 329 ntBASIC2.48□□□□□ -2.01
LIM2P55344 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.48□□□□□ -2.01
LIM2P55344 TIMM9P1-201ENST00000436122 256 ntBASIC2.48□□□□□ -2.01
LIM2P55344 COX6CP2-201ENST00000444980 225 ntBASIC2.48□□□□□ -2.01
LIM2P55344 GDI2P2-201ENST00000445131 608 ntBASIC2.48□□□□□ -2.01
LIM2P55344 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC098826.2-201ENST00000452011 651 ntBASIC2.48□□□□□ -2.01
LIM2P55344 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LIM2P55344 BZW1P2-201ENST00000473537 826 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AL049873.1-201ENST00000480540 376 ntBASIC2.48□□□□□ -2.01
LIM2P55344 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LIM2P55344 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.48□□□□□ -2.01
LIM2P55344 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
LIM2P55344 RNU6-64P-201ENST00000517119 105 ntBASIC2.48□□□□□ -2.01
LIM2P55344 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.48□□□□□ -2.01
LIM2P55344 RPS3AP4-201ENST00000555161 764 ntBASIC2.48□□□□□ -2.01
LIM2P55344 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.48□□□□□ -2.01
LIM2P55344 OR2AS2P-201ENST00000606902 342 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC073308.1-201ENST00000623696 305 ntBASIC2.48□□□□□ -2.01
LIM2P55344 AC093591.3-201ENST00000634516 308 ntBASIC2.48□□□□□ -2.01
LIM2P55344 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LIM2P55344 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LIM2P55344 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.47□□□□□ -2.01
LIM2P55344 AC062016.1-201ENST00000355719 319 ntBASIC2.47□□□□□ -2.01
LIM2P55344 RNU6-553P-201ENST00000364047 96 ntBASIC2.47□□□□□ -2.01
LIM2P55344 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.47□□□□□ -2.01
LIM2P55344 MIR34A-201ENST00000385130 110 ntBASIC2.47□□□□□ -2.01
LIM2P55344 RPS20P2-201ENST00000402520 389 ntBASIC2.47□□□□□ -2.01
LIM2P55344 AL031577.2-201ENST00000404133 280 ntBASIC2.47□□□□□ -2.01
LIM2P55344 RPLP0P7-201ENST00000416050 667 ntBASIC2.47□□□□□ -2.01
LIM2P55344 ARL5AP4-201ENST00000430731 512 ntBASIC2.47□□□□□ -2.01
LIM2P55344 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.47□□□□□ -2.01
LIM2P55344 AL714022.1-201ENST00000439897 151 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms