Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL21P40-201ENST00000428586 483 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC007919.1-201ENST00000429380 217 ntBASIC3.06□□□□□ -1.92
LHX1P48742 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LHX1P48742 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.06□□□□□ -1.92
LHX1P48742 AL512844.2-201ENST00000433990 593 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.06□□□□□ -1.92
LHX1P48742 PGBD4P3-201ENST00000440731 581 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AL135938.1-201ENST00000443141 297 ntBASIC3.06□□□□□ -1.92
LHX1P48742 MTND6P13-201ENST00000443510 523 ntBASIC3.06□□□□□ -1.92
LHX1P48742 MTATP6P30-201ENST00000443540 664 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.06□□□□□ -1.92
LHX1P48742 ST13P20-201ENST00000447996 1065 ntBASIC3.06□□□□□ -1.92
LHX1P48742 RPL37P4-201ENST00000448908 268 ntBASIC3.06□□□□□ -1.92
LHX1P48742 NIPA2P5-201ENST00000452282 464 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.06□□□□□ -1.92
LHX1P48742 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
LHX1P48742 HMGN2P13-201ENST00000476476 274 ntBASIC3.06□□□□□ -1.92
LHX1P48742 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.06□□□□□ -1.92
LHX1P48742 AC096576.1-201ENST00000489014 359 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC010587.1-201ENST00000505809 469 ntBASIC3.06□□□□□ -1.92
LHX1P48742 HIGD1AP13-201ENST00000509878 289 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.06□□□□□ -1.92
LHX1P48742 RNA5SP291-201ENST00000517222 105 ntBASIC3.06□□□□□ -1.92
LHX1P48742 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.06□□□□□ -1.92
LHX1P48742 AC128657.1-201ENST00000549459 145 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AL163153.1-201ENST00000554223 283 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC005771.1-201ENST00000585581 349 ntBASIC3.06□□□□□ -1.92
LHX1P48742 ELOCP29-201ENST00000588193 334 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC073544.2-201ENST00000601155 540 ntBASIC3.06□□□□□ -1.92
LHX1P48742 SEPT7P9-203ENST00000604116 343 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC135507.1-201ENST00000607214 561 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC097065.2-201ENST00000608159 533 ntBASIC3.06□□□□□ -1.92
LHX1P48742 AC131902.3-201ENST00000611767 581 ntBASIC3.06□□□□□ -1.92
LHX1P48742 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.06□□□□□ -1.92
LHX1P48742 FAM35BP-202ENST00000497389 3337 ntBASIC3.06□□□□□ -1.92
LHX1P48742 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LHX1P48742 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LHX1P48742 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
LHX1P48742 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
LHX1P48742 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
LHX1P48742 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LHX1P48742 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LHX1P48742 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LHX1P48742 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LHX1P48742 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 Z85995.1-201ENST00000415547 335 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 FCF1P1-201ENST00000432690 571 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 AP000936.2-201ENST00000447151 681 ntBASIC3.05□□□□□ -1.92
LHX1P48742 SNORD42A-201ENST00000459584 64 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AP001486.1-201ENST00000463339 476 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.05□□□□□ -1.92
LHX1P48742 RPS20P22-201ENST00000473700 357 ntBASIC3.05□□□□□ -1.92
LHX1P48742 LARP1BP2-201ENST00000486594 519 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.05□□□□□ -1.92
LHX1P48742 AC011979.2-201ENST00000527568 352 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.05□□□□□ -1.92
LHX1P48742 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.05□□□□□ -1.92
LHX1P48742 AC006504.3-201ENST00000586818 523 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.05□□□□□ -1.92
LHX1P48742 HSPE1P7-201ENST00000604681 321 ntBASIC3.05□□□□□ -1.92
LHX1P48742 AL137843.1-201ENST00000605078 385 ntBASIC3.05□□□□□ -1.92
LHX1P48742 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.05□□□□□ -1.92
LHX1P48742 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.05□□□□□ -1.92
LHX1P48742 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.05□□□□□ -1.92
LHX1P48742 AL049641.1-201ENST00000441055 1948 ntBASIC3.05□□□□□ -1.92
LHX1P48742 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.04□□□□□ -1.92
LHX1P48742 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LHX1P48742 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.04□□□□□ -1.92
LHX1P48742 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LHX1P48742 SEPT2P1-201ENST00000419651 180 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 AC137499.1-201ENST00000427602 88 ntBASIC3.04□□□□□ -1.92
LHX1P48742 SETP8-201ENST00000435341 628 ntBASIC3.04□□□□□ -1.92
LHX1P48742 MTCO2P16-201ENST00000436962 677 ntBASIC3.04□□□□□ -1.92
LHX1P48742 HIGD1AP11-201ENST00000438361 280 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC009969.1-201ENST00000438726 172 ntBASIC3.04□□□□□ -1.92
LHX1P48742 PIGFP3-201ENST00000441918 722 ntBASIC3.04□□□□□ -1.92
LHX1P48742 RPS24P13-201ENST00000442520 397 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AL022238.1-201ENST00000442557 355 ntBASIC3.04□□□□□ -1.92
LHX1P48742 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.04□□□□□ -1.92
LHX1P48742 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX1P48742 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.04□□□□□ -1.92
LHX1P48742 RNU6-956P-201ENST00000458868 103 ntBASIC3.04□□□□□ -1.92
LHX1P48742 RBM43P1-201ENST00000476891 1081 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AL049873.1-201ENST00000480540 376 ntBASIC3.04□□□□□ -1.92
LHX1P48742 AC117522.3-201ENST00000507974 584 ntBASIC3.04□□□□□ -1.92
LHX1P48742 SNORA31.1-201ENST00000515993 133 ntBASIC3.04□□□□□ -1.92
LHX1P48742 SNORA31.5-201ENST00000516190 133 ntBASIC3.04□□□□□ -1.92
LHX1P48742 RNA5SP337-201ENST00000517007 109 ntBASIC3.04□□□□□ -1.92
LHX1P48742 RN7SKP258-201ENST00000517151 304 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms