Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.18□□□□□ -2.06
CXCL12P48061 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CXCL12P48061 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CXCL12P48061 ADAM3A-203ENST00000461344 2157 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC011477.1-204ENST00000623416 1325 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL12P48061 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL12P48061 RNU1-17P-201ENST00000363022 152 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 RNU1-138P-201ENST00000384093 164 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CXCL12P48061 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 RNU6-584P-201ENST00000410350 95 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 RPL23AP36-201ENST00000413895 458 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
CXCL12P48061 AC092573.2-201ENST00000434546 243 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC084290.1-201ENST00000434995 374 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 NDUFB4P6-201ENST00000436819 366 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 MTND3P1-201ENST00000441336 220 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.17□□□□□ -2.06
CXCL12P48061 AC233279.1-201ENST00000455300 423 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 RPL7P18-201ENST00000478965 734 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 RPL30P14-201ENST00000482744 348 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC091951.3-201ENST00000504093 246 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL12P48061 TPT1P8-201ENST00000510120 555 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AL359273.1-201ENST00000510918 627 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.17□□□□□ -2.06
CXCL12P48061 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.17□□□□□ -2.06
CXCL12P48061 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.17□□□□□ -2.06
CXCL12P48061 CASP1P1-201ENST00000526345 212 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AP003497.1-201ENST00000528472 562 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.17□□□□□ -2.06
CXCL12P48061 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL12P48061 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.17□□□□□ -2.06
CXCL12P48061 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.17□□□□□ -2.06
CXCL12P48061 AP001004.1-201ENST00000582468 324 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AL353997.4-201ENST00000586196 166 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.17□□□□□ -2.06
CXCL12P48061 AL049779.4-201ENST00000604500 156 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 HSPE1P7-201ENST00000604681 321 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AL158042.1-201ENST00000605338 460 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC144521.1-201ENST00000607148 956 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC004067.1-201ENST00000608733 700 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 MIR6076-201ENST00000617521 113 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AP000484.1-201ENST00000620067 1252 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
CXCL12P48061 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.17□□□□□ -2.06
CXCL12P48061 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CXCL12P48061 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.17□□□□□ -2.06
CXCL12P48061 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CXCL12P48061 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CXCL12P48061 DDX43P2-201ENST00000604753 1354 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CXCL12P48061 RNU6-97P-201ENST00000363387 104 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RNA5SP393-201ENST00000363423 117 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RNU5E-8P-201ENST00000363502 116 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RNU6-14P-201ENST00000384630 106 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RNA5SP213-201ENST00000391031 106 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RNA5SP252-201ENST00000391131 119 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AL356057.2-201ENST00000403318 432 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RNU6-757P-201ENST00000410334 100 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.16□□□□□ -2.06
CXCL12P48061 TMEM167AP1-201ENST00000423409 219 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 PPP1R11P2-201ENST00000423543 382 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 RPL27AP8-201ENST00000424277 446 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.16□□□□□ -2.06
CXCL12P48061 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.16□□□□□ -2.06
CXCL12P48061 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AL590664.1-201ENST00000448065 339 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.16□□□□□ -2.06
CXCL12P48061 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AC093281.2-201ENST00000510153 597 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AC108729.3-201ENST00000513484 108 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 SNORA31.15-201ENST00000516771 132 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CXCL12P48061 AC004486.1-201ENST00000546846 233 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.16□□□□□ -2.06
CXCL12P48061 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.16□□□□□ -2.06
CXCL12P48061 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CXCL12P48061 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 BNIP3P40-201ENST00000596017 556 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 NUTF2P8-201ENST00000604593 363 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AL450336.1-201ENST00000605180 586 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AC097478.2-201ENST00000610572 514 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CXCL12P48061 MIR6130-201ENST00000619419 109 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AC010297.1-201ENST00000623948 149 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.16□□□□□ -2.06
CXCL12P48061 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms