Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL28P46779 MTND4P6-201ENST00000438297 472 ntBASIC1.44□□□□□ -2.18
RPL28P46779 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL28P46779 GPM6BP3-201ENST00000442797 145 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC124916.1-201ENST00000444020 547 ntBASIC1.44□□□□□ -2.18
RPL28P46779 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL28P46779 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL28P46779 RNU7-136P-201ENST00000458819 69 ntBASIC1.44□□□□□ -2.18
RPL28P46779 RPL30P9-201ENST00000465586 330 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC126389.1-201ENST00000477436 290 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RPL28P46779 AC118465.1-201ENST00000513820 1271 ntBASIC1.44□□□□□ -2.18
RPL28P46779 RNU4-29P-201ENST00000515943 174 ntBASIC1.44□□□□□ -2.18
RPL28P46779 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RPL28P46779 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.44□□□□□ -2.18
RPL28P46779 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL28P46779 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.44□□□□□ -2.18
RPL28P46779 AL138976.2-201ENST00000563989 694 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.44□□□□□ -2.18
RPL28P46779 MIR5708-201ENST00000579723 85 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC024619.4-201ENST00000580924 316 ntBASIC1.44□□□□□ -2.18
RPL28P46779 MIR5007-201ENST00000583098 95 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AL353997.4-201ENST00000586196 166 ntBASIC1.44□□□□□ -2.18
RPL28P46779 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.44□□□□□ -2.18
RPL28P46779 AC005776.1-201ENST00000603164 290 ntBASIC1.44□□□□□ -2.18
RPL28P46779 RPP40P2-201ENST00000603596 712 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC103810.6-201ENST00000606708 136 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC069294.1-201ENST00000608397 350 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC009159.1-201ENST00000618386 642 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AL162373.1-201ENST00000620433 407 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AC009268.2-201ENST00000621925 457 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AL031601.2-202ENST00000622650 282 ntBASIC1.44□□□□□ -2.18
RPL28P46779 AP002791.1-201ENST00000623291 381 ntBASIC1.44□□□□□ -2.18
RPL28P46779 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPL28P46779 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL28P46779 MTND5P30-201ENST00000452896 1731 ntBASIC1.43□□□□□ -2.18
RPL28P46779 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPL28P46779 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 RNU1-91P-201ENST00000364746 163 ntBASIC1.43□□□□□ -2.18
RPL28P46779 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPL28P46779 MIR518C-201ENST00000384822 101 ntBASIC1.43□□□□□ -2.18
RPL28P46779 SNORA46.1-201ENST00000391069 153 ntBASIC1.43□□□□□ -2.18
RPL28P46779 RNU6-952P-201ENST00000391164 108 ntBASIC1.43□□□□□ -2.18
RPL28P46779 U6atac.2-201ENST00000408644 118 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL28P46779 HMGB1P11-201ENST00000413899 637 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC005005.2-201ENST00000420779 380 ntBASIC1.43□□□□□ -2.18
RPL28P46779 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPL28P46779 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL28P46779 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RPL28P46779 BX322784.1-201ENST00000455793 1077 ntBASIC1.43□□□□□ -2.18
RPL28P46779 RPS3P1-201ENST00000456781 192 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AP001486.1-201ENST00000463339 476 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC055731.1-201ENST00000474387 401 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 AC093801.2-201ENST00000503966 1050 ntBASIC1.43□□□□□ -2.18
RPL28P46779 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
RPL28P46779 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL28P46779 AC010486.1-201ENST00000511793 424 ntBASIC1.43□□□□□ -2.18
RPL28P46779 RNU6-583P-201ENST00000516012 92 ntBASIC1.43□□□□□ -2.18
RPL28P46779 SNORD19.2-201ENST00000516978 73 ntBASIC1.43□□□□□ -2.18
RPL28P46779 SNORA31.25-201ENST00000517242 134 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC104417.1-201ENST00000523974 751 ntBASIC1.43□□□□□ -2.18
RPL28P46779 MTCYBP20-201ENST00000524239 1129 ntBASIC1.43□□□□□ -2.18
RPL28P46779 OR5AQ1P-201ENST00000527596 927 ntBASIC1.43□□□□□ -2.18
RPL28P46779 CYCSP26-201ENST00000534107 320 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.43□□□□□ -2.18
RPL28P46779 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.43□□□□□ -2.18
RPL28P46779 AC105245.1-201ENST00000581934 244 ntBASIC1.43□□□□□ -2.18
RPL28P46779 MIR5002-201ENST00000584713 97 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC009314.1-201ENST00000603871 304 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC069545.1-201ENST00000605671 358 ntBASIC1.43□□□□□ -2.18
RPL28P46779 SDR42E1P2-201ENST00000614861 481 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC009831.4-201ENST00000620744 325 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC019226.1-201ENST00000625666 515 ntBASIC1.43□□□□□ -2.18
RPL28P46779 PISRT1-201ENST00000626175 531 ntBASIC1.43□□□□□ -2.18
RPL28P46779 AC093591.3-201ENST00000634516 308 ntBASIC1.43□□□□□ -2.18
RPL28P46779 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RPL28P46779 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPL28P46779 AP005901.5-201ENST00000545779 1796 ntBASIC1.43□□□□□ -2.18
RPL28P46779 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPL28P46779 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.42□□□□□ -2.18
RPL28P46779 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL28P46779 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPL28P46779 RNU1-73P-201ENST00000383971 164 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AL445529.1-201ENST00000398713 389 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AL590084.2-201ENST00000401481 382 ntBASIC1.42□□□□□ -2.18
RPL28P46779 RPL7P27-201ENST00000403775 720 ntBASIC1.42□□□□□ -2.18
RPL28P46779 SUMO2P12-201ENST00000405924 140 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AL030996.1-201ENST00000411430 235 ntBASIC1.42□□□□□ -2.18
RPL28P46779 AC068533.2-201ENST00000411872 306 ntBASIC1.42□□□□□ -2.18
RPL28P46779 MTND1P21-201ENST00000412991 285 ntBASIC1.42□□□□□ -2.18
RPL28P46779 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.42□□□□□ -2.18
RPL28P46779 ELOCP14-201ENST00000428070 331 ntBASIC1.42□□□□□ -2.18
RPL28P46779 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.42□□□□□ -2.18
RPL28P46779 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms