Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 RNU4-29P-201ENST00000515943 174 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 SNORA31.21-201ENST00000517180 77 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC123904.3-201ENST00000547218 814 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 PCMTD1P2-201ENST00000565017 355 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 Z94722.1-201ENST00000604328 474 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 AL161729.4-201ENST00000604650 476 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 OR10AB1P-201ENST00000609613 938 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC010338.1-201ENST00000621823 717 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC006927.3-201ENST00000638789 384 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
TNFRSF4P43489 AC092593.1-201ENST00000515413 1815 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 ZNF826P-207ENST00000622273 1910 ntBASIC2.81□□□□□ -1.96
TNFRSF4P43489 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TNFRSF4P43489 RNU6-501P-201ENST00000364072 100 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 RNU5A-8P-201ENST00000364102 114 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 MIR1302-8-201ENST00000408342 128 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC099548.1-201ENST00000421443 426 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 RPS27AP14-201ENST00000422868 454 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 DPPA2P1-201ENST00000428060 556 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AL513043.1-201ENST00000439124 535 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AL049734.2-201ENST00000441066 616 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 RPL32P28-201ENST00000443577 397 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 GAPDHP27-201ENST00000447427 1020 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC093392.2-201ENST00000450682 337 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 RPS27AP8-201ENST00000452665 445 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC108059.3-201ENST00000456388 214 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC010631.1-201ENST00000474150 156 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC096725.1-201ENST00000514266 313 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC093331.1-201ENST00000521474 169 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC093012.1-202ENST00000549403 582 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC010653.1-201ENST00000571108 881 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 ROCK1P1-201ENST00000573767 549 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC105129.3-201ENST00000605455 485 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC013412.1-201ENST00000610687 192 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 MIR7844-201ENST00000616161 122 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 SNHG22-203ENST00000617833 660 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC092608.2-201ENST00000624427 218 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 MTND1P37-201ENST00000636562 264 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 AC010149.2-201ENST00000637608 315 ntBASIC2.8□□□□□ -1.96
TNFRSF4P43489 PABPC1P9-201ENST00000426076 1612 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TNFRSF4P43489 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 MT-TH-201ENST00000387441 69 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 RPL17P12-201ENST00000413391 526 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 ZNF863P-201ENST00000426746 417 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AL365184.2-201ENST00000431139 435 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 RPL37P21-201ENST00000435890 276 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC005094.1-201ENST00000440420 368 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 DDX3P2-201ENST00000446138 111 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 Z83846.1-201ENST00000446798 265 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC125238.1-201ENST00000448842 249 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 MTCO1P42-201ENST00000457379 726 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 MTND5P13-201ENST00000513046 1079 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC116347.2-201ENST00000514912 523 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC106038.2-201ENST00000520706 568 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 DEFB108A-201ENST00000530110 222 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AL356057.1-201ENST00000533798 831 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC007115.1-201ENST00000546853 234 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AL157394.1-201ENST00000562983 1224 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC068135.2-201ENST00000569293 1028 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC010620.1-201ENST00000601088 1102 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AL590229.1-201ENST00000603497 542 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC008277.2-201ENST00000605196 797 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC092354.1-201ENST00000606057 376 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 AC090970.3-201ENST00000612566 866 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.79□□□□□ -1.96
TNFRSF4P43489 ELL2P3-201ENST00000457883 1602 ntBASIC2.79□□□□□ -1.96
TNFRSF4P43489 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms