Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.4□□□□□ -2.03
RORAP35398 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.4□□□□□ -2.03
RORAP35398 AP003122.3-201ENST00000526316 255 ntBASIC2.4□□□□□ -2.03
RORAP35398 AC023538.1-201ENST00000534576 736 ntBASIC2.4□□□□□ -2.03
RORAP35398 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.4□□□□□ -2.03
RORAP35398 AC025281.1-201ENST00000567026 265 ntBASIC2.4□□□□□ -2.03
RORAP35398 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.4□□□□□ -2.03
RORAP35398 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
RORAP35398 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
RORAP35398 MTCO2P2-201ENST00000591258 225 ntBASIC2.4□□□□□ -2.03
RORAP35398 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.4□□□□□ -2.03
RORAP35398 AC011890.2-201ENST00000613393 294 ntBASIC2.4□□□□□ -2.03
RORAP35398 AC013476.2-201ENST00000614456 459 ntBASIC2.4□□□□□ -2.03
RORAP35398 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
RORAP35398 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.4□□□□□ -2.03
RORAP35398 AP000484.1-201ENST00000620067 1252 ntBASIC2.4□□□□□ -2.03
RORAP35398 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.4□□□□□ -2.03
RORAP35398 OR4G3P-201ENST00000633500 913 ntBASIC2.4□□□□□ -2.03
RORAP35398 MIR7515-201ENST00000637837 67 ntBASIC2.4□□□□□ -2.03
RORAP35398 AC106754.1-201ENST00000562632 1513 ntBASIC2.4□□□□□ -2.03
RORAP35398 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RORAP35398 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
RORAP35398 AL138713.1-201ENST00000624026 2130 ntBASIC2.39□□□□□ -2.03
RORAP35398 PABPC1P9-201ENST00000426076 1612 ntBASIC2.39□□□□□ -2.03
RORAP35398 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RORAP35398 CCT4P2-201ENST00000233836 1548 ntBASIC2.39□□□□□ -2.03
RORAP35398 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.39□□□□□ -2.03
RORAP35398 AL109755.1-201ENST00000401791 649 ntBASIC2.39□□□□□ -2.03
RORAP35398 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.39□□□□□ -2.03
RORAP35398 RNU6-757P-201ENST00000410334 100 ntBASIC2.39□□□□□ -2.03
RORAP35398 RNA5SP508-201ENST00000411327 119 ntBASIC2.39□□□□□ -2.03
RORAP35398 RNU6-516P-201ENST00000411381 104 ntBASIC2.39□□□□□ -2.03
RORAP35398 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.39□□□□□ -2.03
RORAP35398 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RORAP35398 AC084290.1-201ENST00000434995 374 ntBASIC2.39□□□□□ -2.03
RORAP35398 UBE2V1P13-201ENST00000436983 439 ntBASIC2.39□□□□□ -2.03
RORAP35398 MTND3P1-201ENST00000441336 220 ntBASIC2.39□□□□□ -2.03
RORAP35398 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RORAP35398 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.39□□□□□ -2.03
RORAP35398 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RORAP35398 RPS20P20-201ENST00000460498 340 ntBASIC2.39□□□□□ -2.03
RORAP35398 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.39□□□□□ -2.03
RORAP35398 HMGN1P28-201ENST00000521340 364 ntBASIC2.39□□□□□ -2.03
RORAP35398 OR4R1P-201ENST00000529879 463 ntBASIC2.39□□□□□ -2.03
RORAP35398 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RORAP35398 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RORAP35398 AL049838.1-201ENST00000563647 981 ntBASIC2.39□□□□□ -2.03
RORAP35398 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.39□□□□□ -2.03
RORAP35398 MTND1P8-201ENST00000571424 950 ntBASIC2.39□□□□□ -2.03
RORAP35398 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.39□□□□□ -2.03
RORAP35398 AC245884.10-201ENST00000597355 337 ntBASIC2.39□□□□□ -2.03
RORAP35398 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.39□□□□□ -2.03
RORAP35398 AL356280.1-201ENST00000603614 379 ntBASIC2.39□□□□□ -2.03
RORAP35398 AL139344.1-201ENST00000605228 195 ntBASIC2.39□□□□□ -2.03
RORAP35398 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.39□□□□□ -2.03
RORAP35398 BX664608.1-201ENST00000610519 487 ntBASIC2.39□□□□□ -2.03
RORAP35398 AL133445.2-201ENST00000611191 527 ntBASIC2.39□□□□□ -2.03
RORAP35398 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RORAP35398 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.39□□□□□ -2.03
RORAP35398 AL136981.2-201ENST00000617319 734 ntBASIC2.39□□□□□ -2.03
RORAP35398 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
RORAP35398 AC025034.2-201ENST00000623264 286 ntBASIC2.39□□□□□ -2.03
RORAP35398 AC019226.1-201ENST00000625666 515 ntBASIC2.39□□□□□ -2.03
RORAP35398 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
RORAP35398 AC099063.3-201ENST00000642066 185 ntBASIC2.39□□□□□ -2.03
RORAP35398 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.39□□□□□ -2.03
RORAP35398 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.38□□□□□ -2.03
RORAP35398 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RORAP35398 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RORAP35398 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RORAP35398 RNU6-433P-201ENST00000363216 104 ntBASIC2.38□□□□□ -2.03
RORAP35398 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RORAP35398 RNU6-83P-201ENST00000384568 112 ntBASIC2.38□□□□□ -2.03
RORAP35398 RNU6-754P-201ENST00000391166 107 ntBASIC2.38□□□□□ -2.03
RORAP35398 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.38□□□□□ -2.03
RORAP35398 MTND1P21-201ENST00000412991 285 ntBASIC2.38□□□□□ -2.03
RORAP35398 AC013410.2-201ENST00000422627 201 ntBASIC2.38□□□□□ -2.03
RORAP35398 AC092047.1-201ENST00000424997 240 ntBASIC2.38□□□□□ -2.03
RORAP35398 MTCO3P30-201ENST00000426425 670 ntBASIC2.38□□□□□ -2.03
RORAP35398 GTF2IP20-201ENST00000431663 360 ntBASIC2.38□□□□□ -2.03
RORAP35398 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.38□□□□□ -2.03
RORAP35398 TPT1P14-201ENST00000448018 505 ntBASIC2.38□□□□□ -2.03
RORAP35398 AL139109.1-201ENST00000455491 297 ntBASIC2.38□□□□□ -2.03
RORAP35398 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.38□□□□□ -2.03
RORAP35398 AC135721.1-201ENST00000497954 479 ntBASIC2.38□□□□□ -2.03
RORAP35398 AC091951.3-201ENST00000504093 246 ntBASIC2.38□□□□□ -2.03
RORAP35398 NDUFB4P2-201ENST00000509515 391 ntBASIC2.38□□□□□ -2.03
RORAP35398 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.38□□□□□ -2.03
RORAP35398 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.38□□□□□ -2.03
RORAP35398 AL592221.1-201ENST00000605266 382 ntBASIC2.38□□□□□ -2.03
RORAP35398 AL158042.1-201ENST00000605338 460 ntBASIC2.38□□□□□ -2.03
RORAP35398 AC116312.1-201ENST00000606841 314 ntBASIC2.38□□□□□ -2.03
RORAP35398 OR10AB1P-201ENST00000609613 938 ntBASIC2.38□□□□□ -2.03
RORAP35398 AC092106.3-201ENST00000611308 722 ntBASIC2.38□□□□□ -2.03
RORAP35398 AC093838.1-201ENST00000613014 469 ntBASIC2.38□□□□□ -2.03
RORAP35398 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RORAP35398 AL078595.3-201ENST00000623815 1166 ntBASIC2.38□□□□□ -2.03
RORAP35398 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
RORAP35398 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RORAP35398 AL137003.2-201ENST00000606924 2538 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms