Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A1P12109 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A1P12109 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.5□□□□□ -1.69
COL6A1P12109 EZH2P1-201ENST00000431167 291 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A1P12109 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A1P12109 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A1P12109 RNU7-180P-201ENST00000459240 63 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 ST13P14-201ENST00000474095 734 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A1P12109 RN7SL293P-201ENST00000481765 281 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 AC012158.1-204ENST00000483430 465 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 MLLT10P2-201ENST00000506434 249 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A1P12109 RNU6-27P-201ENST00000516146 107 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 Y_RNA.682-201ENST00000516457 100 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 RNU6-798P-201ENST00000516912 103 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A1P12109 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.5□□□□□ -1.69
COL6A1P12109 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.5□□□□□ -1.69
COL6A1P12109 AC107016.1-201ENST00000550463 337 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A1P12109 AC010205.1-201ENST00000616668 449 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 AC138305.3-201ENST00000624988 240 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL6A1P12109 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
COL6A1P12109 AC007256.1-201ENST00000392253 2765 ntBASIC4.5□□□□□ -1.69
COL6A1P12109 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.5□□□□□ -1.69
COL6A1P12109 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A1P12109 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A1P12109 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A1P12109 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A1P12109 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL6A1P12109 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL6A1P12109 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A1P12109 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 AL672296.1-201ENST00000427780 2158 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 Y_RNA.146-201ENST00000363549 102 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 RNVU1-14-201ENST00000384770 164 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AL136372.1-201ENST00000403060 228 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A1P12109 AC074085.1-201ENST00000413598 418 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A1P12109 RPL36AP6-201ENST00000435770 321 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 PRPS1P1-201ENST00000445305 876 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AL353691.1-201ENST00000451332 387 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 RNU7-152P-201ENST00000458982 64 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 RNU6-1208P-201ENST00000459588 107 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 Y_RNA.654-201ENST00000497848 106 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A1P12109 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A1P12109 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A1P12109 RN7SKP289-201ENST00000517244 295 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AP001804.3-201ENST00000525146 880 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 YPEL5P3-201ENST00000547227 352 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.49□□□□□ -1.69
COL6A1P12109 MIR4644-201ENST00000579929 84 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.49□□□□□ -1.69
COL6A1P12109 AC005000.2-201ENST00000605468 310 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 AC092807.2-201ENST00000609367 243 ntBASIC4.49□□□□□ -1.69
COL6A1P12109 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL6A1P12109 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL6A1P12109 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL6A1P12109 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.49□□□□□ -1.69
COL6A1P12109 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
COL6A1P12109 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A1P12109 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.48□□□□□ -1.69
COL6A1P12109 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.48□□□□□ -1.69
COL6A1P12109 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A1P12109 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL6A1P12109 SNORD113-7-201ENST00000363762 77 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 Y_RNA.395-201ENST00000383945 109 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 SNORD3H-201ENST00000384486 214 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 AL592114.1-201ENST00000403842 483 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 MIR548F5-201ENST00000408421 86 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 RPS29P4-201ENST00000414733 161 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 AC245054.2-201ENST00000415639 319 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 AL139396.1-201ENST00000421137 167 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 AL159987.2-201ENST00000432754 307 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 RPS3AP52-201ENST00000435639 297 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.48□□□□□ -1.69
COL6A1P12109 AL118520.1-201ENST00000450770 291 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A1P12109 snoU109.4-201ENST00000458953 143 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 RPS26P28-201ENST00000470806 348 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.48□□□□□ -1.69
COL6A1P12109 UBE2CP3-201ENST00000502715 450 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A1P12109 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A1P12109 AC007991.1-201ENST00000522680 631 ntBASIC4.48□□□□□ -1.69
COL6A1P12109 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.48□□□□□ -1.69
COL6A1P12109 AP000889.2-201ENST00000532684 490 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms