Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 TPT1P7-201ENST00000458300 517 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 SNORA84-201ENST00000459229 133 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL135752.1-201ENST00000479477 471 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 MTND1P3-201ENST00000484956 952 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 LARP1BP2-201ENST00000486594 519 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AP002812.1-201ENST00000495378 474 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AP003467.2-201ENST00000520175 319 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AL355836.1-201ENST00000555951 870 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL133153.1-201ENST00000557756 303 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 MIR5680-201ENST00000577577 84 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 MIR4528-201ENST00000577763 90 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AC068790.3-201ENST00000602988 553 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.76□□□□□ -1.97
MT-ND1P03886 BX664608.1-201ENST00000610519 487 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AC011939.3-201ENST00000613686 466 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND1P03886 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
MT-ND1P03886 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND1P03886 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.76□□□□□ -1.97
MT-ND1P03886 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MT-ND1P03886 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
MT-ND1P03886 DDX10P1-201ENST00000448545 1933 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.76□□□□□ -1.97
MT-ND1P03886 U8.3-201ENST00000363321 132 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND1P03886 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 RNA5SP354-201ENST00000391247 136 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 FCF1P10-201ENST00000407590 479 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC104332.2-201ENST00000429959 156 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 USP9YP14-201ENST00000430663 563 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 TIMM9P1-201ENST00000436122 256 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 RPS24P1-201ENST00000438550 371 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND1P03886 GAPDHP17-201ENST00000449858 1001 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND1P03886 RPL9P33-201ENST00000484311 566 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC091435.1-201ENST00000505442 584 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC009901.1-201ENST00000506703 541 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND1P03886 NDUFB4P2-201ENST00000509515 391 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.75□□□□□ -1.97
MT-ND1P03886 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND1P03886 MTND3P5-201ENST00000512798 333 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 RNU6-56P-201ENST00000516986 93 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND1P03886 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND1P03886 MIR3146-201ENST00000580367 79 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC008739.2-201ENST00000597006 317 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AL136363.1-201ENST00000605349 337 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC007038.2-201ENST00000608095 740 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC245517.5-201ENST00000611529 162 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC131902.3-201ENST00000611767 581 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND1P03886 AC008250.2-201ENST00000615261 205 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AL136313.1-201ENST00000624804 202 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC019226.1-201ENST00000625666 515 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC010149.2-201ENST00000637608 315 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 ZNF519P1-201ENST00000449011 1626 ntBASIC2.75□□□□□ -1.97
MT-ND1P03886 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MT-ND1P03886 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
MT-ND1P03886 OR5J1P-201ENST00000313544 939 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 RNU1-35P-201ENST00000362782 153 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 RNY4P16-201ENST00000364768 94 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND1P03886 RNU6-741P-201ENST00000383889 107 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 RNU6-1119P-201ENST00000384349 108 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 RNU6-195P-201ENST00000411352 109 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND1P03886 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.74□□□□□ -1.97
MT-ND1P03886 AC244505.5-201ENST00000443639 207 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 CBWD4P-201ENST00000445695 655 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 Z96811.1-201ENST00000445880 108 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 MTCO2P7-201ENST00000446518 666 ntBASIC2.74□□□□□ -1.97
MT-ND1P03886 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.74□□□□□ -1.97
MT-ND1P03886 GSTA11P-201ENST00000452866 669 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms