Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC009163.5-201ENST00000575421 637 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 MIR5194-201ENST00000582634 120 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AP000811.1-201ENST00000603803 651 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AL645944.1-201ENST00000603857 493 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC245517.5-201ENST00000611529 162 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AL442067.2-201ENST00000614033 363 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC004852.3-201ENST00000614131 326 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC008669.1-201ENST00000565823 2178 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC099654.7-201ENST00000635788 2127 ntBASIC1.96□□□□□ -2.1
HLA-DQA1P01909 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DQA1P01909 AC007336.1-201ENST00000576365 3828 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 Y_RNA.46-201ENST00000362695 102 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 Y_RNA.97-201ENST00000363094 102 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MIR491-201ENST00000384877 84 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AL359634.1-202ENST00000404721 284 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AL162578.1-201ENST00000406202 378 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 U3.37-201ENST00000408528 213 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC023141.4-201ENST00000412031 328 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AL513477.1-202ENST00000417061 214 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC098592.1-201ENST00000419352 333 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 FCF1P1-201ENST00000432690 571 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 GDI2P2-201ENST00000445131 608 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 RPL31P41-201ENST00000477967 372 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC114797.1-201ENST00000514003 728 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 RNU6-927P-201ENST00000516199 100 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 RNA5SP290-201ENST00000517133 127 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 PSMA2P1-201ENST00000526365 646 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MTATP6P15-201ENST00000527233 835 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC093012.1-202ENST00000549403 582 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MTND1P24-201ENST00000552175 861 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AL035413.2-201ENST00000604801 525 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC004805.2-201ENST00000605382 482 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 OR10AB1P-201ENST00000609613 938 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MIR8057-201ENST00000620957 69 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC007671.2-201ENST00000637344 619 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AP003399.1-201ENST00000637534 361 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC022336.2-201ENST00000568966 2538 ntBASIC1.95□□□□□ -2.1
HLA-DQA1P01909 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DQA1P01909 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC026241.1-201ENST00000517873 2142 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MIR208A-201ENST00000362287 71 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RNU1-105P-201ENST00000363470 161 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 SNORA70.4-201ENST00000365509 134 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RNU6-278P-201ENST00000390945 109 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RPS20P2-201ENST00000402520 389 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 USP9YP13-201ENST00000417797 480 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC011233.1-201ENST00000422812 283 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 MTCO2P17-201ENST00000424336 677 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RPL35AP12-201ENST00000425362 338 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 ELOCP14-201ENST00000428070 331 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 ELOCP7-201ENST00000439968 331 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AL831737.1-201ENST00000441288 271 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 NANOGNBP1-201ENST00000448444 480 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 RPL37P4-201ENST00000448908 268 ntBASIC1.94□□□□□ -2.1
HLA-DQA1P01909 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 TEX41-209ENST00000451478 452 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DQA1P01909 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms