Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 DUSP12P1-201ENST00000612874 516 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 AL390240.1-201ENST00000612950 384 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 uc_338.34-201ENST00000617467 174 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 MTND1P37-201ENST00000636562 264 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DQA2P01906 ZNF285B-201ENST00000561698 1767 ntBASIC3.33□□□□□ -1.88
HLA-DQA2P01906 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 MIR141-201ENST00000384975 95 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AL160275.3-201ENST00000423876 471 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AL121601.2-201ENST00000438019 707 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AC104058.1-201ENST00000448028 297 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 CECR9-201ENST00000453421 199 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 SCARNA18-201ENST00000459004 134 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 RPL37P6-201ENST00000460682 294 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 RPL21P104-201ENST00000464143 478 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 RN7SL323P-201ENST00000494712 295 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 SUMO2P6-201ENST00000505273 288 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AC009901.1-201ENST00000506703 541 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 RNA5SP290-201ENST00000517133 127 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 MIR2116-201ENST00000517221 80 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 SNORA62.6-201ENST00000606322 83 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AL355073.2-201ENST00000612106 557 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 uc_338.32-201ENST00000615087 172 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 uc_338.11-201ENST00000619132 160 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AL357559.1-201ENST00000622228 274 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 AL512643.1-201ENST00000635735 524 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 PWAR6-201ENST00000552334 4618 ntBASIC3.32□□□□□ -1.88
HLA-DQA2P01906 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQA2P01906 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC008725.1-201ENST00000605123 2263 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC007785.2-201ENST00000598627 1916 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 SNORA72.1-201ENST00000363485 129 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RNU6-867P-201ENST00000364956 107 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 Y_RNA.373-201ENST00000365600 103 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RPL32P23-201ENST00000397237 405 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 FGF7P8-201ENST00000402994 292 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RNU4-46P-201ENST00000410818 138 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RNU6-193P-201ENST00000410977 107 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RPL21P109-201ENST00000422213 475 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AL590383.1-201ENST00000428602 75 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RPS20P22-201ENST00000473700 357 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AL160314.1-201ENST00000490836 438 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 CCDC34P1-201ENST00000507441 517 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 MTND4P7-201ENST00000523876 130 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC118273.2-201ENST00000532092 465 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 BNIP3P6-201ENST00000549284 499 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AL118558.2-201ENST00000556294 238 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC005730.3-201ENST00000583067 366 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC053481.4-201ENST00000583164 216 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC244505.7-201ENST00000599675 272 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 BNIP3P10-201ENST00000605360 577 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 RNU6-89P-201ENST00000606519 100 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 MIR378J-201ENST00000611988 109 ntBASIC3.31□□□□□ -1.88
HLA-DQA2P01906 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQA2P01906 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms