Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC122133.1-201ENST00000613964 233 ntBASIC3.2□□□□□ -1.9
GGPS1O95749 AL161629.2-201ENST00000615347 275 ntBASIC3.2□□□□□ -1.9
GGPS1O95749 uc_338.12-201ENST00000616344 181 ntBASIC3.2□□□□□ -1.9
GGPS1O95749 AC104010.1-201ENST00000616889 150 ntBASIC3.2□□□□□ -1.9
GGPS1O95749 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.2□□□□□ -1.9
GGPS1O95749 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.2□□□□□ -1.9
GGPS1O95749 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
GGPS1O95749 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
GGPS1O95749 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
GGPS1O95749 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GGPS1O95749 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.19□□□□□ -1.9
GGPS1O95749 RNU6-140P-201ENST00000384566 108 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 Y_RNA.560-201ENST00000384689 102 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AL031577.2-201ENST00000404133 280 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.19□□□□□ -1.9
GGPS1O95749 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 DDX3P2-201ENST00000446138 111 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC087588.1-201ENST00000462203 316 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC138853.1-201ENST00000503549 823 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC025881.1-201ENST00000518851 512 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC022616.6-201ENST00000520479 119 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.19□□□□□ -1.9
GGPS1O95749 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
GGPS1O95749 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.19□□□□□ -1.9
GGPS1O95749 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.19□□□□□ -1.9
GGPS1O95749 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
GGPS1O95749 WISP1-OT1-201ENST00000602893 642 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AL035413.2-201ENST00000604801 525 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC008277.2-201ENST00000605196 797 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC239868.4-201ENST00000608318 671 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AC005858.4-201ENST00000623191 700 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 AF246928.1-201ENST00000623768 87 ntBASIC3.19□□□□□ -1.9
GGPS1O95749 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
GGPS1O95749 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
GGPS1O95749 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
GGPS1O95749 AL049545.1-201ENST00000401856 572 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GGPS1O95749 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.18□□□□□ -1.9
GGPS1O95749 ELOCP17-201ENST00000414751 326 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 NUP35P1-201ENST00000422734 947 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 RPS6P15-201ENST00000431996 751 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 FCF1P1-201ENST00000432690 571 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 EPS15P1-201ENST00000448836 336 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.18□□□□□ -1.9
GGPS1O95749 RNU7-23P-201ENST00000459465 62 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
GGPS1O95749 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.18□□□□□ -1.9
GGPS1O95749 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.18□□□□□ -1.9
GGPS1O95749 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.18□□□□□ -1.9
GGPS1O95749 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.18□□□□□ -1.9
GGPS1O95749 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
GGPS1O95749 MIR5697-201ENST00000578045 78 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
GGPS1O95749 DPPA3P3-201ENST00000603842 430 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 AL022161.1-201ENST00000604390 213 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 AC121334.2-201ENST00000605387 271 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 AC105129.3-201ENST00000605455 485 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
GGPS1O95749 AL603755.1-201ENST00000619504 163 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 AC010149.2-201ENST00000637608 315 ntBASIC3.18□□□□□ -1.9
GGPS1O95749 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
GGPS1O95749 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
GGPS1O95749 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.17□□□□□ -1.9
GGPS1O95749 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GGPS1O95749 FTLP6-201ENST00000355274 422 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 RNY3P13-201ENST00000365542 102 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 MTCYBP36-201ENST00000404146 440 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 RNU2-62P-201ENST00000410868 191 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 USP9YP13-201ENST00000417797 480 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 ZNF90P2-204ENST00000419323 1075 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.17□□□□□ -1.9
GGPS1O95749 ARPC3P1-201ENST00000437218 533 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AL109933.2-201ENST00000452651 260 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 MTND4LP3-201ENST00000468320 276 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.17□□□□□ -1.9
GGPS1O95749 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.17□□□□□ -1.9
GGPS1O95749 AP000797.1-201ENST00000478870 387 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AF131216.2-201ENST00000512316 564 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AC106038.2-201ENST00000520706 568 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GGPS1O95749 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.17□□□□□ -1.9
GGPS1O95749 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.17□□□□□ -1.9
GGPS1O95749 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.17□□□□□ -1.9
GGPS1O95749 AC090888.1-201ENST00000561335 1141 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AC135628.1-201ENST00000568867 534 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.17□□□□□ -1.9
GGPS1O95749 AP001981.2-201ENST00000603241 418 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AC092354.1-201ENST00000606057 376 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms